RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 HNRNPKP61978 463 aaKnown RBP eCLIP4.06□□□□□ -1.765e-13■■■■■ 46
SMC4-208ENST00000467468 CDK3Q00526 305 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 LTBQ06643 244 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CRYZQ08257 329 aaKnown RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 MZT1Q08AG7 82 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CTTNQ14247 550 aaKnown RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 ZNF585BQ52M93 769 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 FAM109BQ6ICB4 259 aaPredicted RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 ZNF534Q76KX8 674 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 DSG4Q86SJ6 1040 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 GCSAMQ8N6F7 178 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 C10orf53Q8N6V4 93 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 EMC1Q8N766 993 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 ARL10Q8N8L6 244 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 SPC24Q8NBT2 197 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 ATAD1Q8NBU5 361 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 PAPD5Q8NDF8 572 aaKnown RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 TBC1D16Q8TBP0 767 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 MGARPQ8TDB4 240 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 EXT2Q93063 718 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CDHR1Q96JP9 859 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CCDC43Q96MW1 224 aaKnown RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 INTS14Q96SY0 518 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 MMTAG2Q9BU76 263 aaKnown RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 ADPRHL2Q9NX46 363 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CWC25Q9NXE8 425 aaPredicted RBP4.06□□□□□ -1.76
SMC4-208ENST00000467468 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 TINAGQ9UJW2 476 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 CDH7Q9ULB5 785 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
SMC4-208ENST00000467468 GPRASP1Q5JY77 1395 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 CNTNAP2Q9UHC6 1331 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 A0A1B0GVT2 93 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 FEZF1A0PJY2 475 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 GOLGA6L9A6NEM1 432 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 I6L893 689 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 J3QR06 171 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 PTGESO14684 152 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 HTATSF1O43719 755 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 ITM2AO43736 263 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SLC28A2O43868 658 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SSX4O60224 188 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ACAA1P09110 424 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 KCNA5P22460 613 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 EEF1B2P24534 225 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 ITGB8P26012 769 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 BDKRB2P30411 391 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 HOXA11P31270 313 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 STX2P32856 288 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 MTHFRP42898 656 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 AMPHP49418 695 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 PCYT1AP49585 367 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 TAS2R38P59533 333 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SNRPEP62304 92 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 Q0VFX4 171 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SMU1Q2TAY7 513 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 TWISTNBQ3B726 338 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 GLRA4Q5JXX5 417 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 RNASEH2BQ5TBB1 312 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 SFMBT2Q5VUG0 894 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 FAM91A1Q658Y4 838 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 MOXD1Q6UVY6 613 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SLC36A4Q6YBV0 504 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 Q6ZSV7 163 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 GET4Q7L5D6 327 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 DET1Q7L5Y6 550 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ZNF367Q7RTV3 350 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ATG9AQ7Z3C6 839 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ZC3HC1Q86WB0 502 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 TIGD4Q8IY51 512 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 PM20D2Q8IYS1 436 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 OR14A16Q8NHC5 309 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 C9orf43Q8TAL5 461 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 GRAPLQ8TC17 118 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 NEUROG1Q92886 237 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SNX21Q969T3 373 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 SPSB1Q96BD6 273 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ERLEC1Q96DZ1 483 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 MUS81Q96NY9 551 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 WNT5BQ9H1J7 359 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 MMADHCQ9H3L0 296 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 FZD8Q9H461 694 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 CD93Q9NPY3 652 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 MCM9Q9NXL9 1143 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 RCC2Q9P258 522 aaKnown RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 LEF1Q9UJU2 399 aaPredicted RBP4.05□□□□□ -1.76
SMC4-208ENST00000467468 PADI3Q9ULW8 664 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 B3GALT5Q9Y2C3 310 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 KCNK7Q9Y2U2 307 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 NFS1Q9Y697 457 aa4.05□□□□□ -1.76
SMC4-208ENST00000467468 ANKUB1A6NFN9 424 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 C4orf47A7E2U8 309 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 HEPACAM2A8MVW5 462 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 TMEM189-UBE2V1I3L0A0 370 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 ACOT8O14734 319 aa4.04□□□□□ -1.76
SMC4-208ENST00000467468 SLC30A4O14863 429 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms