RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 OLFM1Q99784 485 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 SRMSQ9H3Y6 488 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TNPO3Q9Y5L0 923 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 DOCK6Q96HP0 2047 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 FAM159BA6NKW6 160 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TMEM114B3SHH9 223 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 AK4P27144 223 aaPredicted RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 CDKN2DP55273 166 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 SLC44A4Q53GD3 710 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 CAPN13Q6MZZ7 669 aaPredicted RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 KIAA0408Q6ZU52 694 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 ZNF572Q7Z3I7 529 aaPredicted RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 MFSD6LQ8IWD5 586 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TAGAPQ8N103 731 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 METTL27Q8N6F8 245 aaPredicted RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 NPAS2Q99743 824 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 KIFC1Q9BW19 673 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TAC3Q9UHF0 121 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.21□□□□□ -0.61
SNX13-202ENST00000409604 MRASO14807 208 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 LAMTOR5O43504 91 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 METAP1P53582 386 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 TP53BP2Q13625 1128 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 HNRNPA1L2Q32P51 320 aaKnown RBP11.21□□□□□ -0.61
SNX13-202ENST00000409604 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 CYP20A1Q6UW02 462 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 FBXO30Q8TB52 745 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 PTCD2Q8WV60 388 aaKnown RBP11.21□□□□□ -0.61
SNX13-202ENST00000409604 NCSTNQ92542 709 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 KLHDC7BQ96G42 594 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 MYRFLQ96LU7 910 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 CDH19Q9H159 772 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 FBXW2Q9UKT8 454 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 MYO10Q9HD67 2058 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 KPNA5O15131 536 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 DLX3O60479 287 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 STX5Q13190 355 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 DMC1Q14565 340 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 TRIP10Q15642 601 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 PTCHD3Q3KNS1 767 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 CYP4V2Q6ZWL3 525 aaPredicted RBP11.21□□□□□ -0.61
SNX13-202ENST00000409604 OR2A12Q8NGT7 310 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 WDR48Q8TAF3 677 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 IL21RQ9HBE5 538 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 NMRK1Q9NWW6 199 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 ZNF212Q9UDV6 495 aa11.21□□□□□ -0.61
SNX13-202ENST00000409604 DRGXA6NNA5 263 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 NARSO43776 548 aaKnown RBP11.21□□□□□ -0.62
SNX13-202ENST00000409604 OTCP00480 354 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 LBPP18428 481 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 S100A3P33764 101 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.62
SNX13-202ENST00000409604 FAM180BQ6P0A1 224 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 GK5Q6ZS86 529 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 LRRTM4Q86VH4 590 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 GLYATL1Q969I3 302 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 NT5C3BQ969T7 300 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.62
SNX13-202ENST00000409604 SMAD5Q99717 465 aaKnown RBP11.21□□□□□ -0.62
SNX13-202ENST00000409604 ZSCAN5AQ9BUG6 496 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 OSBPL1AQ9BXW6 950 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 ASPSCR1Q9BZE9 553 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 EGFL7Q9UHF1 273 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 POLG2Q9UHN1 485 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 NDUFAF1Q9Y375 327 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.62
SNX13-202ENST00000409604 A0A0C4DFX4 3053 aa11.21□□□□□ -0.62
SNX13-202ENST00000409604 RGS14O43566 566 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 EGFP01133 1207 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 POLR2CP19387 275 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 DRD4P21917 467 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RAB8AP61006 207 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 PCBP2Q15366 365 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNX13-202ENST00000409604 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 LZICQ8WZA0 190 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 SCRN2Q96FV2 425 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TOE1Q96GM8 510 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 PPM1MQ96MI6 270 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CDCA3Q99618 268 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 SLC17A9Q9BYT1 436 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 DNAJC11Q9NVH1 559 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 MYOFQ9NZM1 2061 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 ZNF860A6NHJ4 632 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CCDC154A6NI56 674 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 EDF1O60869 148 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 THRAP10827 490 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CTHP32929 405 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 SCTRP47872 440 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 LRRC32Q14392 662 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 LYPLAL1Q5VWZ2 237 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 KRT80Q6KB66 452 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 EFL1Q7Z2Z2 1120 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 CLYBLQ8N0X4 340 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms