RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ABCG4Q9H172 646 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 TBC1D29Q9UFV1 150 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 SLC23A2Q9UGH3 650 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 CRYL1Q9Y2S2 319 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 PLEKHM1Q9Y4G2 1056 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
SNCA-202ENST00000345009 ZNF106Q9H2Y7 1883 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 DCDC2BA2VCK2 349 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 CPED1A4D0V7 1026 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 EME2A4GXA9 379 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 E5RI56 91 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 NUDT21O43809 227 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 GIMD1P0DJR0 217 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 PKMP14618 531 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 PNLIPP16233 465 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 CHRM3P20309 590 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 ACP1P24666 158 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 RPL10P27635 214 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 FMO4P31512 558 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 SLC1A2P43004 574 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 LEPRP48357 1165 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 CTBP1Q13363 440 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 KRT33BQ14525 404 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 SEMA3AQ14563 771 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 FASTKD3Q14CZ7 662 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 UGT3A1Q6NUS8 523 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 OTOAQ7RTW8 1153 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 GALNT7Q86SF2 657 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 RELL1Q8IUW5 271 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 SLC35F3Q8IY50 421 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 C2CD4AQ8NCU7 369 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 GPR156Q8NFN8 814 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 WDR48Q8TAF3 677 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 BAHD1Q8TBE0 780 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 LPGAT1Q92604 370 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 TMEM159Q96B96 161 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 CXorf40BQ96DE9 158 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 C9orf72Q96LT7 481 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 P2RY12Q9H244 342 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 PRDM8Q9NQV8 689 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 MOCS1Q9NZB8 636 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 IL1RAPL1Q9NZN1 696 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 CORO1CQ9ULV4 474 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 NFU1Q9UMS0 254 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 PCYT1BQ9Y5K3 369 aaPredicted RBP11.61□□□□□ -0.55
SNCA-202ENST00000345009 HEBP2Q9Y5Z4 205 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 COLEC10Q9Y6Z7 277 aa11.61□□□□□ -0.55
SNCA-202ENST00000345009 MYLKQ15746 1914 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 PIKFYVEQ9Y2I7 2098 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SGTAO43765 313 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 VIPP01282 170 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 TUBBP07437 444 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 XRCC1P18887 633 aaPredicted RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 NDUFS1P28331 727 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SSTR1P30872 391 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SKIV2L2P42285 1042 aaKnown RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 GPR3P46089 330 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 CD151P48509 253 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 NFE2L1Q14494 772 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SMAD1Q15797 465 aaKnown RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 SEPT7Q16181 437 aaKnown RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 TTLL9Q3SXZ7 439 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 CCDC157Q569K6 752 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 TEDDM1Q5T9Z0 273 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 CAPN12Q6ZSI9 719 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SLC26A11Q86WA9 606 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 DENND6AQ8IWF6 608 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 NAGSQ8N159 534 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SFRP1Q8N474 314 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 ARL14Q8N4G2 192 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 KYQ8NBH2 561 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 ZFPM2Q8WW38 1151 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 COG4Q9H9E3 785 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 SARS2Q9NP81 518 aaKnown RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 FBXO6Q9NRD1 293 aaPredicted RBP11.6□□□□□ -0.55
SNCA-202ENST00000345009 LRIT1Q9P2V4 623 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 FAM8A1Q9UBU6 413 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 ST14Q9Y5Y6 855 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 PRSS21Q9Y6M0 314 aa11.6□□□□□ -0.55
SNCA-202ENST00000345009 TRBV23OR9-2A0A075B6M9 112 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 SPAARA0A1B0GVQ0 90 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 TCRBV9S1A1TA0A576 114 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 KDM1AO60341 852 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 NOBOXO60393 691 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 VPS26AO75436 327 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 RFPL3O75679 317 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 HAUS5O94927 633 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 SLC19A1P41440 591 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 FASLGP48023 281 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 PPM1FP49593 454 aaPredicted RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 HHEXQ03014 270 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 HSPA14Q0VDF9 509 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 NAB1Q13506 487 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 BOP1Q14137 746 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 KYNUQ16719 465 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 PPM1JQ5JR12 505 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms