RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 STC1P52823 247 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 RAD23AP54725 363 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 GTF2H2Q13888 395 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CST9Q5W186 159 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 KCTD11Q693B1 232 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ANKRD34AQ69YU3 496 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 NANOGP8Q6NSW7 305 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 GTF2H2CQ6P1K8 395 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ADGRG2Q8IZP9 1017 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 NKAPQ8N5F7 415 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 SEPT8Q92599 483 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 IL12RB2Q99665 862 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 NAA50Q9GZZ1 169 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 NANOGQ9H9S0 305 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 MRGBPQ9NV56 204 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ASB3Q9Y575 518 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 TMEM88BA6NKF7 163 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SLC38A8A6NNN8 435 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 H3BNX3 289 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 RFXANKO14593 260 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SMAD6O43541 496 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 RECQL5O94762 991 aaPredicted RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 COX7A2P14406 83 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SGSHP51688 502 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 C21orf59P57076 290 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SERINC3Q13530 473 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SYT16Q17RD7 645 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CLLU1OSQ5K130 101 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 TSPAN33Q86UF1 283 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CMTR2Q8IYT2 770 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 LINC01465Q8N7H1 131 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 GSTO2Q9H4Y5 243 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 HMX1Q9NP08 348 aaPredicted RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 NDUFA13Q9P0J0 144 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SPATA7Q9P0W8 599 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SLC22A14Q9Y267 594 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 PHIPQ8WWQ0 1821 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 UNCXA6NJT0 531 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 G3V2T6 193 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 XYLBO75191 536 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 FADS2O95864 444 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 SLC6A4P31645 630 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 MAGEA6P43360 314 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 MEF2AQ02078 507 aaPredicted RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 FPGSQ05932 587 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 IL10RBQ08334 325 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ABRAXAS2Q15018 415 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ZNF549Q6P9A3 640 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CYP20A1Q6UW02 462 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ABRAXAS1Q6UWZ7 409 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 RFLNAQ6ZTI6 216 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 KIAA0408Q6ZU52 694 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 UBE2R2Q712K3 238 aaPredicted RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 SERINC5Q86VE9 423 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 MDGA1Q8NFP4 955 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SLC22A12Q96S37 553 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 MRPS26Q9BYN8 205 aaKnown RBP8.11□□□□□ -1.11
HPS4-201ENST00000336873 ABCB8Q9NUT2 735 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 FER1L6Q2WGJ9 1857 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 COCHO43405 550 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SLC7A1P30825 629 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 HCAR3P49019 387 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 HK2P52789 917 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 NUDT6P53370 316 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ACSM2AQ08AH3 577 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 NAE1Q13564 534 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TRIP4Q15650 581 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 CHRNA6Q15825 494 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 XKR6Q5GH73 641 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 PAGE2BQ5JRK9 111 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 C6orf136Q5SQH8 315 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ACSM2BQ68CK6 577 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 GALNT18Q6P9A2 607 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 RD3Q7Z3Z2 195 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 CYB5D2Q8WUJ1 264 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TMBIM1Q969X1 311 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 OTUB1Q96FW1 271 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 EGLN2Q96KS0 407 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 C11orf84Q9BUA3 381 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 SMPD3Q9NY59 655 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 SLCO3A1Q9UIG8 710 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 RABL2BQ9UNT1 228 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SLC45A1Q9Y2W3 748 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SPAG17Q6Q759 2223 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ZNF638Q14966 1978 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 SMIM30A4D0T7 59 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TRIM24O15164 1050 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 CCL16O15467 120 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 KRT6AP02538 564 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 KRT6BP04259 564 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms