RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 LDLRAP1Q5SW96 308 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 CPNE8Q86YQ8 564 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 PLD5Q8N7P1 536 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 ZFPM2Q8WW38 1151 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 CPT1BQ92523 772 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 RAPGEF5Q92565 580 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 PNPLA2Q96AD5 504 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 ZNF501Q96CX3 271 aaPredicted RBP18.54■□□□□ 0.56
SCARF1-204ENST00000570902 CHST8Q9H2A9 424 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 MAP10Q9P2G4 905 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 PSMD13Q9UNM6 376 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 SPO11Q9Y5K1 396 aa18.54■□□□□ 0.56
SCARF1-204ENST00000570902 MEN1O00255 615 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MT-CYBP00156 380 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MTHFD1P11586 935 aaKnown RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MRPL49Q13405 166 aaKnown RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 XRCC4Q13426 336 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 GPR19Q15760 415 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MED25Q71SY5 747 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MAMDC2Q7Z304 686 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 VSIG1Q86XK7 387 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 BEND7Q8N7W2 519 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 ENDOVQ8N8Q3 282 aaKnown RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 RASGEF1AQ8N9B8 481 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 TMEM102Q8N9M5 508 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 Q8NA96 180 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 FDCSPQ8NFU4 85 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 SPATA22Q8NHS9 363 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 PRR7Q8TB68 274 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 MAK16Q9BXY0 300 aaKnown RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 NLNQ9BYT8 704 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 GLOD4Q9HC38 313 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 IL26Q9NPH9 171 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 IMP3Q9NV31 184 aaKnown RBP18.53■□□□□ 0.56
SCARF1-204ENST00000570902 SOHLH2Q9NX45 425 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 TCFL5Q9UL49 500 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 SHANK1Q9Y566 2161 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 ESPL1Q14674 2120 aa18.53■□□□□ 0.56
SCARF1-204ENST00000570902 A0A0A6YYK5 440 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-204ENST00000570902 LRRD1A4D1F6 860 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 APOL1O14791 398 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 PMPCBO75439 489 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 ZFXP17010 805 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-204ENST00000570902 SPAM1P38567 509 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 TNNT3P45378 269 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-204ENST00000570902 VAV2P52735 878 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 CTSCP53634 463 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 RRADP55042 308 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 ZBED6P86452 979 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 NFE2L1Q14494 772 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 PPP2R5EQ16537 467 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 PRR30Q53SZ7 412 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-204ENST00000570902 METRNLQ641Q3 311 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 SLC6A19Q695T7 634 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 SLC9A4Q6AI14 798 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 TMEM220Q6QAJ8 160 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 FAM83HQ6ZRV2 1179 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-204ENST00000570902 DSELQ8IZU8 1212 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 TTC30BQ8N4P2 665 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 SLC38A9Q8NBW4 561 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 DDHD1Q8NEL9 900 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 CLIP3Q96DZ5 547 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 NUDT9Q9BW91 350 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 MFRPQ9BY79 579 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 GPR83Q9NYM4 423 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 BTRCQ9Y297 605 aa18.52■□□□□ 0.56
SCARF1-204ENST00000570902 KLHL33A6NCF5 533 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 ZNF185O15231 689 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 H2AFZP0C0S5 128 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 ITGA9Q13797 1035 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 TEX44Q53QW1 395 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 PLEKHS1Q5SXH7 462 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 H2AFVQ71UI9 128 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 GLIS1Q8NBF1 620 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 CTNNBL1Q8WYA6 563 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-204ENST00000570902 IQCDQ96DY2 449 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 OLFM3Q96PB7 478 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 SYTL2Q9HCH5 934 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 IFNKQ9P0W0 207 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 LUZP4Q9P127 313 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 ACSL5Q9ULC5 683 aa18.51■□□□□ 0.55
SCARF1-204ENST00000570902 CFAP20Q9Y6A4 193 aaKnown RBP18.51■□□□□ 0.55
SCARF1-204ENST00000570902 GLYATL1P3A0A0U1RQE8 302 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 OR6C74A6NCV1 312 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 A6NL46 340 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 OR2AG2A6NM03 316 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 PRKAA1Q13131 559 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 LONRF2Q1L5Z9 754 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 FAM182AQ5T1J6 154 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 FAM151BQ6UXP7 276 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 RBMXL3Q8N7X1 1067 aaKnown RBP18.5■□□□□ 0.55
SCARF1-204ENST00000570902 CPLX3Q8WVH0 158 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 C12orf66Q96MD2 445 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 INSM2Q96T92 566 aaPredicted RBP18.5■□□□□ 0.55
SCARF1-204ENST00000570902 SMAD5Q99717 465 aaKnown RBP18.5■□□□□ 0.55
SCARF1-204ENST00000570902 WWP1Q9H0M0 922 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 KIR3DX1Q9H7L2 352 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 HACD3Q9P035 362 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 C5AR2Q9P296 337 aa18.5■□□□□ 0.55
SCARF1-204ENST00000570902 FAM153AQ9UHL3 310 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms