RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRAFD1-205ENST00000548277 FER1L5A0AVI2 2057 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 OR6C74A6NCV1 312 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 LCA5LO95447 670 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 NDST3O95803 873 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 PTMSP20962 102 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 CHRNA4P43681 627 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 GPS2Q13227 327 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 INPP5JQ15735 1006 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 ARMC6Q6NXE6 501 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 SYVN1Q86TM6 617 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC38A9Q8NBW4 561 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 THAP4Q8WY91 577 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 CLIP3Q96DZ5 547 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 VPS35Q96QK1 796 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 INSM2Q96T92 566 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 TLR10Q9BXR5 811 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 GPR87Q9BY21 358 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 RAB33BQ9H082 229 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 WWP1Q9H0M0 922 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 IL26Q9NPH9 171 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 SLAMF7Q9NQ25 335 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 KCND1Q9NSA2 647 aa11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 SAE1Q9UBE0 346 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 SNRNP200O75643 2136 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-205ENST00000548277 USP9YO00507 2555 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 A0A0A6YYK5 440 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 TCP11X1B4DZS4 312 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 CPNE3O75131 537 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 RECKO95980 971 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 POLBP06746 335 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 TPM3P06753 285 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 KLK3P07288 261 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 POLR2CP19387 275 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 HSD11B2P80365 405 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 KRT33BQ14525 404 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 GSE1Q14687 1217 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 PDK1Q15118 436 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 TEX44Q53QW1 395 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 ODF2Q5BJF6 829 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 FNBP1LQ5T0N5 605 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 KAZNQ674X7 775 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 KLHL35Q6PF15 583 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 ENDOVQ8N8Q3 282 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 OR4E2Q8NGC2 313 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 BRSK1Q8TDC3 778 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 BLOC1S5Q8TDH9 187 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 CTNNBL1Q8WYA6 563 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 C12orf66Q96MD2 445 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 NENFQ9UMX5 172 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 SNX7Q9UNH6 387 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 HYOU1Q9Y4L1 999 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
TRAFD1-205ENST00000548277 LRRK2Q5S007 2527 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 ZGRF1Q86YA3 2104 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 OR5K3A6NET4 321 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TLCD2A6NGC4 264 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC9B1P1A6NJY1 282 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 C3orf70A6NLC5 250 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 PPP1R12AO14974 1030 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 KRT86O43790 486 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TMEM63AO94886 807 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 KRT1P04264 644 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 MTHFD1P11586 935 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 CDH3P22223 829 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 PTPN3P26045 913 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 AKT1P31749 480 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SPAM1P38567 509 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 KPNA2P52292 529 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TUBB4BP68371 445 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TUBB2AQ13885 445 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 KYNUQ16719 465 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SIRPB2Q5JXA9 342 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 PLEKHS1Q5SXH7 462 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TMTC4Q5T4D3 741 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 GPRC6AQ5T6X5 926 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC9A4Q6AI14 798 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 JMJD6Q6NYC1 403 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 GLT6D1Q7Z4J2 308 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 OOSP2Q86WS3 158 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 D2HGDHQ8N465 521 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SEC14L1Q92503 715 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TADA1Q96BN2 335 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 C19orf60Q96EN9 201 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 FCRL4Q96PJ5 515 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 NRTNQ99748 197 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 TUBB2BQ9BVA1 445 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 NUDT9Q9BW91 350 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms