RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 C9orf172C9J069 976 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CCL22O00626 93 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TTI1O43156 1089 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 KCNJ13O60928 360 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 POP7O75817 140 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 APRTP07741 180 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FGF3P11487 239 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TPH1P17752 444 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AKT1P31749 480 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CLN3Q13286 438 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CLCA4Q14CN2 919 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 WDR74Q6RFH5 385 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 TMEM26Q6ZUK4 368 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AMZ2Q86W34 360 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 BEND7Q8N7W2 519 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NAT14Q8WUY8 206 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 USP7Q93009 1102 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SGF29Q96ES7 293 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 UCK1Q9HA47 277 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PIH1D1Q9NWS0 290 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FOXJ2Q9P0K8 574 aa17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 AKAP7Q9P0M2 348 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DNMT3AQ9Y6K1 912 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SGTAO43765 313 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 VIPP01282 170 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 VCLP18206 1134 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 MSH3P20585 1137 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 HADHAP40939 763 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 PPM1FP49593 454 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ARSDP51689 593 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CXADRP78310 365 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NFE2L1Q14494 772 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 KCTD19Q17RG1 926 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FAM83HQ6ZRV2 1179 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DET1Q7L5Y6 550 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 LINC00523Q86TU6 105 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 NCSTNQ92542 709 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 DNAJC1Q96KC8 554 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 BBC3Q96PG8 261 aaPredicted RBP17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 ZMYND15Q9H091 742 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 CPNE5Q9HCH3 593 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 POT1Q9NUX5 634 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 OGFRQ9NZT2 677 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 SLC30A1Q9Y6M5 507 aa17.52■□□□□ 0.4
TNFRSF1A-209ENST00000536717 FAM187AA6NFU0 413 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MAPK9P45984 424 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 POU6F1Q14863 301 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 BROXQ5VW32 411 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 XKR5Q6UX68 686 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ARHGAP22Q7Z5H3 698 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNX20Q7Z614 316 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TRIM48Q8IWZ4 208 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 AGBL5Q8NDL9 886 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PMEPA1Q969W9 287 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ZNF514Q96K75 400 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CARD6Q9BX69 1037 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 L2HGDHQ9H9P8 463 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SLC40A1Q9NP59 571 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 EIF2B3Q9NR50 452 aaKnown RBP17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CRLS1Q9UJA2 301 aa17.52■□□□□ 0.39
TNFRSF1A-209ENST00000536717 H7C0S8 307 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RAD51CO43502 376 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ITGALP20701 1170 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PBLDP30039 288 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MC4RP32245 332 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CSTF2P33240 577 aaKnown RBP eCLIP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CDKN1CP49918 316 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 UCNP55089 124 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TMPRSS3P57727 454 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TGIF1Q15583 401 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SOWAHCQ53LP3 525 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNAP47Q5SQN1 464 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 C8orf74Q6P047 294 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GPR155Q7Z3F1 870 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 NXPE1Q8N323 547 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ULK4Q96C45 1275 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TRIM51Q9BSJ1 452 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 B3GNT4Q9C0J1 378 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 FAM96AQ9H5X1 160 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 NLE1Q9NVX2 485 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 OCIAD1Q9NX40 245 aa17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MN1Q10571 1320 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ATRXP46100 2492 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TRBV5-4A0A0C4DH59 114 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 A8MU76 341 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SUN1O94901 812 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TPSB2P20231 275 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TERF1P54274 439 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CDK16Q00536 496 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GPR18Q14330 331 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TPSAB1Q15661 275 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 BCL7AQ4VC05 210 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 METRNLQ641Q3 311 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PPP1R21Q6ZMI0 780 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PCGF5Q86SE9 256 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MMGT1Q8N4V1 131 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms