RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PIH1D1Q9NWS0 290 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 MN1Q10571 1320 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 F8W8V4 182 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCL22O00626 93 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 TOX3O15405 576 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 MLNP12872 115 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 PPARGP37231 505 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 NFE2L1Q14494 772 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 KCNJ11Q14654 390 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 CLCA4Q14CN2 919 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZNF658BQ4V348 819 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCDC38Q502W7 563 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 PLXDC1Q8IUK5 500 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 AGBL5Q8NDL9 886 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 SLCO2A1Q92959 643 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 CXorf40BQ96DE9 158 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 DPH1Q9BZG8 443 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 TREX1Q9NSU2 369 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 EPHA6Q9UF33 1036 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 WDR37Q9Y2I8 494 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 SSUH2Q9Y2M2 353 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 LOXL2Q9Y4K0 774 aa20.47■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCDC162PA2VCL2 907 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 TNFSF15O95150 251 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 KRT14P02533 472 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 C9P02748 559 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 ANKRD34CP0C6C1 535 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 JMJD7P0C870 316 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 HOXB3P14651 431 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 CD151P48509 253 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 CDKN1CP49918 316 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 DRG2P55039 364 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCDC173Q0VFZ6 552 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 RPE65Q16518 533 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 DBN1Q16643 649 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 AARS2Q5JTZ9 985 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 PHF19Q5T6S3 580 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 NKAIN2Q5VXU1 208 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 CAPRIN2Q6IMN6 1127 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 XKR5Q6UX68 686 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 FAM83HQ6ZRV2 1179 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 TAS2R42Q7RTR8 314 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 ARHGAP22Q7Z5H3 698 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 MPP5Q8N3R9 675 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 MCUQ8NE86 351 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 OR4L1Q8NH43 312 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 HDAC10Q969S8 669 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCDC74BQ96LY2 380 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 KIFC1Q9BW19 673 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 AP1M1Q9BXS5 423 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 FAM96AQ9H5X1 160 aa20.46■□□□□ 0.87
TRAPPC9-215ENST00000524162 OR52A4PA6NMU1 304 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 USP27XA6NNY8 438 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 UBXN7O94888 489 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 MTHFD1P11586 935 aaKnown RBP20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 CD82P27701 267 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 NDUFS1P28331 727 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 PRAMEP78395 509 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 PLOD1Q02809 727 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 GPS1Q13098 491 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 C16orf72Q14CZ0 275 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 SEPT7Q16181 437 aaKnown RBP20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 LRRC69Q6ZNQ3 347 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 ZNF534Q76KX8 674 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 DET1Q7L5Y6 550 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 ZNF778Q96MU6 729 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 PCYOX1Q9UHG3 505 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 PCDHGA3Q9Y5H0 932 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 HEBP2Q9Y5Z4 205 aa20.45■□□□□ 0.86
TRAPPC9-215ENST00000524162 B4E171 279 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 GOT2P00505 430 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 SLC35G4P0C7Q5 338 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 TSPAN7P41732 249 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 GPR18Q14330 331 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 ZNF449Q6P9G9 518 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 KLHL35Q6PF15 583 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 ZNF761Q86XN6 746 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 TBC1D10AQ9BXI6 508 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 XAB2Q9HCS7 855 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 CHRAC1Q9NRG0 131 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 RNF14Q9UBS8 474 aa20.44■□□□□ 0.86
TRAPPC9-215ENST00000524162 MAGEB16A2A368 324 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 LIN7AO14910 233 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 FTH1P02794 183 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 CSTF2P33240 577 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 CAPZBP47756 277 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 GNG11P61952 73 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 TMEM164Q5U3C3 297 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 CFAP206Q8IYR0 622 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 CPT1BQ92523 772 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 NCSTNQ92542 709 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 NAPGQ99747 312 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 COG4Q9H9E3 785 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 SMARCAL1Q9NZC9 954 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 OGFRQ9NZT2 677 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 SEMA5BQ9P283 1151 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 SLC2A6Q9UGQ3 507 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 PYCARDQ9ULZ3 195 aa20.43■□□□□ 0.86
TRAPPC9-215ENST00000524162 SOX13Q9UN79 622 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms