RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 GLT6D1Q7Z4J2 308 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 PROSER1Q86XN7 944 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 LGI2Q8N0V4 545 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 STK40Q8N2I9 435 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 METTL25Q8N6Q8 603 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CANT1Q8WVQ1 401 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 TFAP2CQ92754 450 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 EXT2Q93063 718 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CENPNQ96H22 339 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 SEMA6AQ9H2E6 1030 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NOL11Q9H8H0 719 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 CLK4Q9HAZ1 481 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 AGPAT4Q9NRZ5 378 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 LEF1Q9UJU2 399 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 AK5Q9Y6K8 562 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NUP205Q92621 2012 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 UBA6A0AVT1 1052 aaPredicted RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ZNF839A8K0R7 811 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 CCL22O00626 93 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ZNF197O14709 1029 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ECI2O75521 394 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 SIX3O95343 332 aaPredicted RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 ASLP04424 464 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 FOSL2P15408 326 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 CAPN3P20807 821 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 SLC6A2P23975 617 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 HOXD9P28356 352 aaPredicted RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 SLC6A4P31645 630 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 LTBRP36941 435 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ERVK-8P63133 956 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 PRKCQQ04759 706 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 VPS26BQ4G0F5 336 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ARHGAP15Q53QZ3 475 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 XKR7Q5GH72 579 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 PAQR3Q6TCH7 311 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 DENND1CQ8IV53 801 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 CMTM8Q8IZV2 173 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 PAPD5Q8NDF8 572 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 TRPV3Q8NET8 790 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 ZFP28Q8NHY6 868 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 KCNJ9Q92806 393 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 FUBP1Q96AE4 644 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 NMD3Q96D46 503 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 CIB1Q99828 191 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 TUBB1Q9H4B7 451 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 SLC52A3Q9NQ40 469 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 CLDND1Q9NY35 253 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 SUN2Q9UH99 717 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 TRMT6Q9UJA5 497 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 AGO1Q9UL18 857 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 RNF11Q9Y3C5 154 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 PCDHA9Q9Y5H5 950 aa12.28□□□□□ -0.44
AFF3-215ENST00000498090 TNPO3Q9Y5L0 923 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
AFF3-215ENST00000498090 MYLKQ15746 1914 aa12.27□□□□□ -0.44
AFF3-215ENST00000498090 A0A087WXM4 84 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 H7C0S8 307 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 ZNF701M0R085 212 aaPredicted RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 FXYD1O00168 92 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 LEFTY2O00292 366 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 SNX2O60749 519 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 SLC22A3O75751 556 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 OR6B1O95007 311 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 ESR1P03372 595 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 PKMP14618 531 aaKnown RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 TSPAN8P19075 237 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 CR2P20023 1033 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 ATP6V1B2P21281 511 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 FMO4P31512 558 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 IL2P60568 153 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 NFYCQ13952 458 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 GRB7Q14451 532 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 CBX2Q14781 532 aaPredicted RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 ZNF783Q6ZMS7 281 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 Q6ZNB5 142 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 FKBP9P1Q75LS8 142 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 GALNT13Q8IUC8 556 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 NPAS3Q8IXF0 933 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 TBC1D21Q8IYX1 336 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 AADATQ8N5Z0 425 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 RMDN1Q96DB5 314 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 PDLIM5Q96HC4 596 aaKnown RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 ZNF382Q96SR6 550 aa12.27□□□□□ -0.45
AFF3-215ENST00000498090 TDRD1Q9BXT4 1180 aaKnown RBP12.27□□□□□ -0.45
AFF3-215ENST00000498090 YTHDF1Q9BYJ9 559 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms