RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GFERP55789 205 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
CHMP3-208ENST00000486404 CACNG1Q06432 222 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 CCDC38Q502W7 563 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 MANEAQ5SRI9 462 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 DCAF12Q5T6F0 453 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 IRGCQ6NXR0 463 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ZNF449Q6P9G9 518 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 KLHL35Q6PF15 583 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 PPHLN1Q8NEY8 458 aaKnown RBP12.63□□□□□ -0.39
CHMP3-208ENST00000486404 GPR150Q8NGU9 434 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 HM13Q8TCT9 377 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 NAT14Q8WUY8 206 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 C12orf66Q96MD2 445 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 CCNL2Q96S94 520 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-208ENST00000486404 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ASPSCR1Q9BZE9 553 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 B3GNT4Q9C0J1 378 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 WWP1Q9H0M0 922 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ETNK1Q9HBU6 452 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 SLC40A1Q9NP59 571 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ZDHHC3Q9NYG2 299 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ACSL5Q9ULC5 683 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 WDR37Q9Y2I8 494 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 B4E171 279 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 H7C0S8 307 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 ETS1P14921 441 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 TSPAN7P41732 249 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 MSLNQ13421 630 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 SEMA5AQ13591 1074 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 KRT33BQ14525 404 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 CLCA4Q14CN2 919 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 RPE65Q16518 533 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 CCNG2Q16589 344 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 SERPINA9Q86WD7 417 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 ZFAND4Q86XD8 727 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 OR2L2Q8NH16 312 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 TEFMQ96QE5 360 aaKnown RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 TLR10Q9BXR5 811 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 PDP2Q9P2J9 529 aa12.62□□□□□ -0.39
CHMP3-208ENST00000486404 CFAP20Q9Y6A4 193 aaKnown RBP12.62□□□□□ -0.39
CHMP3-208ENST00000486404 QSOX1O00391 747 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 IFRD1O00458 451 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 SUN1O94901 812 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 POLBP06746 335 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 ANKRD34CP0C6C1 535 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 CXCR5P32302 372 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 TGIF1Q15583 401 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 DBN1Q16643 649 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 METRNLQ641Q3 311 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 ANKS6Q68DC2 871 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 ARMC6Q6NXE6 501 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 DUS1LQ6P1R4 473 aaKnown RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 DRICH1Q6PGQ1 229 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 AFTPHQ6ULP2 937 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 C4orf22Q6V702 233 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 ARHGAP22Q7Z5H3 698 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 VASH2Q86V25 355 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 CFAP206Q8IYR0 622 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 ZSCAN1Q8NBB4 408 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 JPH3Q8WXH2 748 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 LINC00615Q96LM1 132 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 C9orf72Q96LT7 481 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 RMDN2Q96LZ7 410 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 TTC1Q99614 292 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 EIF2B3Q9NR50 452 aaKnown RBP12.61□□□□□ -0.39
CHMP3-208ENST00000486404 SMARCAL1Q9NZC9 954 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 OGFRQ9NZT2 677 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 PCDHGA3Q9Y5H0 932 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 HEBP2Q9Y5Z4 205 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 B3GALT1Q9Y5Z6 326 aa12.61□□□□□ -0.39
CHMP3-208ENST00000486404 TRBV5-4A0A0C4DH59 114 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 MROH6A6NGR9 719 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 AGAP14A8MT82 685 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 F8W8V4 182 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 TOX3O15405 576 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-208ENST00000486404 ZSCAN12O43309 604 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 AP2A2O94973 939 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 C9P02748 559 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 ZSCAN5DPP0CG00 497 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 PRSS56P0CW18 603 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 NSG1P42857 185 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 LEPRP48357 1165 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms