RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PDLIM5Q96HC4 596 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 LINC00615Q96LM1 132 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 FAM8A1Q9UBU6 413 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 ZNHIT2Q9UHR6 403 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 MOSPD1Q9UJG1 213 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 TSR3Q9UJK0 312 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 DNMT3AQ9Y6K1 912 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 A6NNZ2 444 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 MEI4A8MW99 385 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 RBP1P09455 135 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 GSTM1P09488 218 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 DHRS4L1P0CG22 281 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 CBSLP0DN79 551 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 KELP23276 732 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 HTR1BP28222 390 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 CBSP35520 551 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 MDH1P40925 334 aaKnown RBP17.27■□□□□ 0.36
UPF3A-206ENST00000480362 RABIFP47224 123 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 THOP1P52888 689 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 GUCY1A3Q02108 690 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 GSTM4Q03013 218 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 TPRG1LQ5T0D9 272 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 ENPP7Q6UWV6 458 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 CYHR1Q6ZMK1 362 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 C11orf96Q7Z7L8 435 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 ISCA2Q86U28 154 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 TAX1BP1Q86VP1 789 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 LONP2Q86WA8 852 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 TMEFF1Q8IYR6 380 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 TMEM151AQ8N4L1 468 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 FBXL6Q8N531 539 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 OR13H1Q8NG92 308 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 ASZ1Q8WWH4 475 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 HSPA12BQ96MM6 686 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 MRPL57Q9BQC6 102 aaKnown RBP17.27■□□□□ 0.36
UPF3A-206ENST00000480362 RMI1Q9H9A7 625 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 MRPL40Q9NQ50 206 aaKnown RBP17.27■□□□□ 0.36
UPF3A-206ENST00000480362 CPSF2Q9P2I0 782 aaKnown RBP17.27■□□□□ 0.36
UPF3A-206ENST00000480362 IKZF3Q9UKT9 509 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 EML5Q05BV3 1969 aa17.27■□□□□ 0.36
UPF3A-206ENST00000480362 C17orf113A0A1B0GUU1 675 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SLC5A10A0PJK1 596 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 WDR91A4D1P6 747 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 MGAT4DA6NG13 374 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 CDC7O00311 574 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 KMOO15229 486 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 GPC4O75487 556 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SBK3P0C264 359 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 MAOBP27338 520 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 GBX1Q14549 363 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 PLA2G4EQ3MJ16 856 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 ZNF658BQ4V348 819 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SYTL3Q4VX76 610 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 TECRLQ5HYJ1 363 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 PIWIL4Q7Z3Z4 852 aaKnown RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 VRK3Q8IV63 474 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 CFAP206Q8IYR0 622 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 MYO1HQ8N1T3 1032 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 OR56A4Q8NGH8 313 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 OR2L2Q8NH16 312 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 DYDC1Q8WWB3 177 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 KIAA1191Q96A73 305 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 PTERQ96BW5 349 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SCARF2Q96GP6 870 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SLC6A18Q96N87 628 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 DUSP15Q9H1R2 295 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 MRPL46Q9H2W6 279 aaKnown RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 TFB2MQ9H5Q4 396 aaKnown RBP17.26■□□□□ 0.35
UPF3A-206ENST00000480362 ALG9Q9H6U8 611 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 AASDHPPTQ9NRN7 309 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 XPR1Q9UBH6 696 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 GULP1Q9UBP9 304 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SLC23A2Q9UGH3 650 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 ADAM21Q9UKJ8 722 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 CDYLQ9Y232 598 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
UPF3A-206ENST00000480362 NPEPPSL1A6NEC2 478 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 TARM1B6A8C7 271 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 TK2O00142 265 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 EIF3FO00303 357 aaPredicted RBP17.25■□□□□ 0.35
UPF3A-206ENST00000480362 BTN3A1O00481 513 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 LIN7AO14910 233 aaPredicted RBP17.25■□□□□ 0.35
UPF3A-206ENST00000480362 SLCO2B1O94956 709 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
UPF3A-206ENST00000480362 CPA3P15088 417 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 KCNC1P48547 511 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 SERPINB4P48594 390 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 IL9RQ01113 521 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 OR4D1Q15615 310 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
UPF3A-206ENST00000480362 PYCR3Q53H96 274 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 AMZ2Q86W34 360 aa17.25■□□□□ 0.35
UPF3A-206ENST00000480362 LILRA3Q8N6C8 439 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms