RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TPM2P07951 284 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 HNRNPH3P31942 346 aaKnown RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 SERPINB6P35237 376 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 CTSCP53634 463 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 MYL5Q02045 173 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 PIGHQ14442 188 aaPredicted RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 ZRSR2Q15696 482 aaKnown RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 ASIC2Q16515 512 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 RPE65Q16518 533 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 IFI16Q16666 785 aaKnown RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 ATP13A5Q4VNC0 1218 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 ZNF789Q5FWF6 425 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 PLEKHS1Q5SXH7 462 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 B4GALNT4Q76KP1 1039 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 LRRTM4Q86VH4 590 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 D2HGDHQ8N465 521 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 TRAM1L1Q8N609 369 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 ZBTB2Q8N680 514 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 NAT14Q8WUY8 206 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 ZNF501Q96CX3 271 aaPredicted RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 NAP1L5Q96NT1 182 aaPredicted RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 TIMM29Q9BSF4 260 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 ILKAPQ9H0C8 392 aaPredicted RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 THAP2Q9H0W7 228 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 BPIFA1Q9NP55 256 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 FGF21Q9NSA1 209 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 POT1Q9NUX5 634 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 TMEM63CQ9P1W3 806 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 AMACRQ9UHK6 382 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 RARRES3Q9UL19 164 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 DNPEPQ9ULA0 475 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 PSMD13Q9UNM6 376 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
VCL-204ENST00000472585 SCINQ9Y6U3 715 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 PKDREJQ9NTG1 2253 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
VCL-204ENST00000472585 NIPBLQ6KC79 2804 aaeCLIP9.1□□□□□ -0.956e-6■■■□□ 16.7
VCL-204ENST00000472585 GPR89AB7ZAQ6 455 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 F5H423 210 aaPredicted RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A9O60656 530 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 TMEM63AO94886 807 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 GPR89BP0CG08 455 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 MYBL1P10243 752 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A6P19224 532 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 IDSP22304 550 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A1P22309 533 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A4P22310 534 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 RRADP55042 308 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 DCDC1P59894 354 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 TMEM115Q12893 351 aaPredicted RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 RAPSNQ13702 412 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 KRT81Q14533 505 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 NOMO1Q15155 1222 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CRB2Q5IJ48 1285 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 ZNF569Q5MCW4 686 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CCDC122Q5T0U0 273 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CCDC183Q5T5S1 534 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 LYPLAL1Q5VWZ2 237 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 PPP1R2P3Q6NXS1 205 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 GDF7Q7Z4P5 450 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 RASGEF1AQ8N9B8 481 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 SIDT2Q8NBJ9 832 aaKnown RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 SPATA22Q8NHS9 363 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UBXN4Q92575 508 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 INPP5DQ92835 1189 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 MR1Q95460 341 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 FAF2Q96CS3 445 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 ZNF514Q96K75 400 aaPredicted RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 FCRL4Q96PJ5 515 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 ZSCAN5AQ9BUG6 496 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A7Q9HAW7 530 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A10Q9HAW8 530 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 UGT1A8Q9HAW9 530 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 MAGEE1Q9HCI5 957 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 MRPL47Q9HD33 250 aaKnown RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 AGPAT4Q9NRZ5 378 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 KCND1Q9NSA2 647 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 NFKBIL1Q9UBC1 381 aaPredicted RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 B3GNT3Q9Y2A9 372 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 CFAP20Q9Y6A4 193 aaKnown RBP9.1□□□□□ -0.95
VCL-204ENST00000472585 CSMD2Q7Z408 3487 aa9.1□□□□□ -0.95
VCL-204ENST00000472585 VEGFDO43915 354 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 SCRG1O75711 98 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 POP7O75817 140 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 MTA2O94776 668 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 SLC4A1P02730 911 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 CYP1A2P05177 515 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 SPTBP11277 2137 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 ITGA3P26006 1051 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 RORAP35398 523 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 GLRBP48167 497 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 ARCN1P48444 511 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 FOXL2P58012 376 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 KLHL30Q0D2K2 578 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms