RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 CLDN19Q8N6F1 224 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 GPBAR1Q8TDU6 330 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 PDLIM5Q96HC4 596 aaKnown RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 ZIM3Q96PE6 472 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 GSDMCQ9BYG8 508 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 CARS2Q9HA77 564 aaKnown RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 SYTL2Q9HCH5 934 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 TMEM74BQ9NUR3 256 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 APOBEC3BQ9UH17 382 aaKnown RBP12.81□□□□□ -0.36
LIMS2-203ENST00000409254 MED16Q9Y2X0 877 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 SLCO1B1Q9Y6L6 691 aa12.81□□□□□ -0.36
LIMS2-203ENST00000409254 OR2AG2A6NM03 316 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TPP1O14773 563 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 GPC4O75487 556 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 WISP3O95389 354 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ZNF806P0C7X5 589 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 COL6A2P12110 1019 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ZNF37AP17032 561 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 JUNDP17535 347 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 FMO4P31512 558 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 RAB10P61026 200 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 GRIK2Q13002 908 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 INSCQ1MX18 579 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TAF1BQ53T94 588 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TRIM61Q5EBN2 209 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TPRG1LQ5T0D9 272 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 METRNLQ641Q3 311 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 DOK6Q6PKX4 331 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 NKAPQ8N5F7 415 aaKnown RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 CD200R1Q8TD46 325 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 INPP5DQ92835 1189 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ELMO2Q96JJ3 720 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 CYP4F12Q9HCS2 524 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 MKS1Q9NXB0 559 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 SLC17A6Q9P2U8 582 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TRMT6Q9UJA5 497 aaKnown RBP12.8□□□□□ -0.36
LIMS2-203ENST00000409254 TMEM98Q9Y2Y6 226 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 PCDHGB2Q9Y5G2 931 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
LIMS2-203ENST00000409254 PCNX2A6NKB5 2137 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 PIEZO1Q92508 2521 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 A0A087X1B8 175 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 A0A1B0GTQ1 180 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 A0A1B0GVT2 93 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 SLC5A10A0PJK1 596 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 HMX2A2RU54 273 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 NEMP2A6NFY4 417 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 OR5K4A6NMS3 321 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 LMO7DNF2Z398 122 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ARHGAP33O14559 1287 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 POP7O75817 140 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ALDOAP04075 364 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 MPOP05164 745 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 DGKAP23743 735 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 CCT8P50990 548 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 USP10Q14694 798 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 KRT71Q3SY84 523 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 SYTL3Q4VX76 610 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 TNFAIP8L3Q5GJ75 292 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 RBM20Q5T481 1227 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 GKN2Q86XP6 184 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 HID1Q8IV36 788 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 SLC22A15Q8IZD6 547 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ZBTB2Q8N680 514 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 PHC3Q8NDX5 983 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 UHMK1Q8TAS1 419 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 MZB1Q8WU39 189 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 TMEM159Q96B96 161 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ALKBH8Q96BT7 664 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 DNAJC28Q9NX36 388 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 GULP1Q9UBP9 304 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ZNHIT2Q9UHR6 403 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 PRSS21Q9Y6M0 314 aa12.79□□□□□ -0.36
LIMS2-203ENST00000409254 ATXN2Q99700 1313 aaKnown RBP12.79□□□□□ -0.36
LIMS2-203ENST00000409254 HEATR5BQ9P2D3 2071 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 TRIM49D1C9J1S8 452 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 NIPSNAP2O75323 286 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 PIAS2O75928 621 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 FUCA1P04066 466 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 RPN2P04844 631 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 CFIP05156 583 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 GSTA1P08263 222 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 MYZAPP0CAP1 466 aa12.78□□□□□ -0.36
LIMS2-203ENST00000409254 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms