RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SPATS2LQ9NUQ6 558 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 KLQ9UEF7 1012 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 TSR3Q9UJK0 312 aaKnown RBP18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 PILRBQ9UKJ0 227 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 IKZF3Q9UKT9 509 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 CDYLQ9Y232 598 aa18.68■□□□□ 0.58
CHMP4A-201ENST00000347519 ZFC3H1O60293 1989 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 TMEM131Q92545 1883 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 TNFRSF10CO14798 259 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 TSPAN12O95859 305 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 MPOP05164 745 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNF37AP17032 561 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 KELP23276 732 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 NUBP1P53384 320 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 ARHGAP8P85298 464 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 BNC1Q01954 994 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 NFE2L1Q14494 772 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 GBX1Q14549 363 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 TCEA2Q15560 299 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 PRR23BQ6ZRT6 265 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 CDHR3Q6ZTQ4 885 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 IQCHQ86VS3 1027 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 GALNT13Q8IUC8 556 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 HID1Q8IV36 788 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 OXR1Q8N573 874 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 GOLGA6L1Q8N7Z2 621 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 FAM174AQ8TBP5 190 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 KCTD4Q8WVF5 259 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 ZNF514Q96K75 400 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 C12orf65Q9H3J6 166 aaKnown RBP18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 RMI1Q9H9A7 625 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 POPDC3Q9HBV1 291 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 IGSF5Q9NSI5 407 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 GPSM3Q9Y4H4 160 aa18.67■□□□□ 0.58
CHMP4A-201ENST00000347519 SLC5A10A0PJK1 596 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 GPR89AB7ZAQ6 455 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 QSOX1O00391 747 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 VILLO15195 856 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 KMOO15229 486 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 GPC4O75487 556 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 GPR89BP0CG08 455 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 ACP5P13686 325 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 PREPP48147 710 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 NXPH1P58417 271 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 NHLH1Q02575 133 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 BOP1Q14137 746 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 PTK2BQ14289 1009 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 CHST15Q7LFX5 561 aaPredicted RBP18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 OTOAQ7RTW8 1153 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 CFAP206Q8IYR0 622 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 BANPQ8N9N5 519 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 OR2L2Q8NH16 312 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 CCL4L1Q8NHW4 92 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 ACMSDQ8TDX5 336 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 EEF1AKMT1Q8WVE0 214 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 PIGKQ92643 395 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 NXNL1Q96CM4 212 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 UBXN10Q96LJ8 280 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 OR2M4Q96R27 311 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 DNAJC16Q9Y2G8 782 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 ACOT9Q9Y305 439 aa18.66■□□□□ 0.58
CHMP4A-201ENST00000347519 A0A1B0GTW7 788 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 A0A1B0GVT2 93 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 MGAT4DA6NG13 374 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 MAGEC1O60732 1142 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 CCDC166P0CW27 439 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 PDHA2P29803 388 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 ATP5DP30049 168 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 SKIV2L2P42285 1042 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 HSPA14Q0VDF9 509 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 MPP2Q14168 576 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 CSHL1Q14406 222 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 TAF1BQ53T94 588 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 PRAMEF14Q5SWL7 426 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 PEAR1Q5VY43 1037 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 UGT3A1Q6NUS8 523 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 CYHR1Q6ZMK1 362 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 AMZ2Q86W34 360 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 PRSS33Q8NF86 280 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 LINGO1Q96FE5 620 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 GPR78Q96P69 363 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 TMEM168Q9H0V1 697 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 STMN4Q9H169 189 aaPredicted RBP18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 COG4Q9H9E3 785 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 FSCN3Q9NQT6 498 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 KLHL42Q9P2K6 505 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 TLK1Q9UKI8 766 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 KCNK6Q9Y257 313 aa18.65■□□□□ 0.58
CHMP4A-201ENST00000347519 ADAMTS9Q9P2N4 1935 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 A0A087X1B8 175 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 PRR19A6NJB7 356 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 HMGB1P1B2RPK0 211 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 TYROBPO43914 113 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 RASGRP1O95267 797 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 CELA2BP08218 269 aaPredicted RBP18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 BRAFP15056 766 aa18.64■□□□□ 0.57
CHMP4A-201ENST00000347519 PI4KAP42356 2102 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms