RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 URADA6NGE7 173 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 A8MT66 165 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 DUSP11O75319 330 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 ASGR1P07306 291 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 MTHFD1P11586 935 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 AP1S1P61966 158 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 RPS14P62263 151 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 ERVK-8P63133 956 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 DLG1Q12959 904 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 NADK2Q4G0N4 442 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 VARS2Q5ST30 1063 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 OLFML1Q6UWY5 402 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 OR13C4Q8NGS5 318 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 FAM210AQ96ND0 272 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 GULP1Q9UBP9 304 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 LRRC42Q9Y546 428 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TLL2Q9Y6L7 1015 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TYROBPO43914 113 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 FKBP1BP68106 108 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 AIF1LQ9BQI0 150 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 OAZ3Q9UMX2 235 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 FAM234BA2RU67 622 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 TMEM233B4DJY2 109 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 PDLIM1O00151 329 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 GRM6O15303 877 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CDH5P33151 784 aaPredicted RBP13.58□□□□□ -0.24
RTN4-202ENST00000337526 YAP1P46937 504 aaKnown RBP13.58□□□□□ -0.24
RTN4-202ENST00000337526 SNAPC1Q16533 368 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 SEC14L1Q92503 715 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 ARL5AQ9Y689 179 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 NDUFS2O75306 463 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 PPM1AP35813 382 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 ECT2LQ008S8 904 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CREMQ03060 361 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 FAM180AQ6UWF9 173 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 KRT77Q7Z794 578 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 C2orf73Q8N5S3 287 aaPredicted RBP13.58□□□□□ -0.24
RTN4-202ENST00000337526 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 IMP3Q9NV31 184 aaKnown RBP13.58□□□□□ -0.24
RTN4-202ENST00000337526 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 SLIT2O94813 1529 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 MAGEB17A8MXT2 336 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 MATN2O00339 956 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 NOBOXO60393 691 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 DLDP09622 509 aaKnown RBP13.58□□□□□ -0.24
RTN4-202ENST00000337526 PCSK2P16519 638 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CCR3P51677 355 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 IL18R1Q13478 541 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 TCEAL1Q15170 157 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 CHPFQ8IZ52 775 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 PPP1R14AQ96A00 147 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 FERD3LQ96RJ6 166 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 LMAN2LQ9H0V9 348 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 KLHL31Q9H511 634 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 EXD2Q9NVH0 621 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 ING3Q9NXR8 418 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 TESMINQ9Y4I5 508 aa13.58□□□□□ -0.24
RTN4-202ENST00000337526 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 JAG1P78504 1218 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 TAF1AQ15573 450 aaPredicted RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 ZNF697Q5TEC3 545 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FAM46CQ5VWP2 391 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FUT10Q6P4F1 479 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 RAD51AP1Q96B01 352 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 AP2M1Q96CW1 435 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 LRRC58Q96CX6 371 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FEM1CQ96JP0 617 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 B3GALT6Q96L58 329 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 ABCB9Q9NP78 766 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
RTN4-202ENST00000337526 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
RTN4-202ENST00000337526 STON1Q9Y6Q2 735 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms