RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 FKBP6O75344 327 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MTX2O75431 263 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 CRCPO75575 148 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 LEFTY1O75610 366 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 FGF19O95750 216 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 SNRPB2P08579 225 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 VIPR2P41587 438 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GDF5P43026 501 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 KIF19Q2TAC6 998 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MMEL1Q495T6 779 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GPR33Q49SQ1 333 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MACC1Q6ZN28 852 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MBOAT1Q6ZNC8 495 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 KIAA0907Q7Z7F0 614 aaPredicted RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 KBTBD6Q86V97 674 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 KIRREL3Q8IZU9 778 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ZBTB2Q8N680 514 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 PHOSPHO2Q8TCD6 241 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 SCAMP4Q969E2 229 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ZNF641Q96N77 438 aaPredicted RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 C19orf43Q9BQ61 176 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 APOL5Q9BWW9 433 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MRPL1Q9BYD6 325 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 CERS4Q9HA82 394 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 NUDT4Q9NZJ9 180 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 TBC1D14Q9P2M4 693 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ANGPTL2Q9UKU9 493 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 MRPS23Q9Y3D9 190 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 XIRP2A4UGR9 3374 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 CXorf51AA0A1B0GTR3 108 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 CA3P07451 260 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 HSPA7P48741 367 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 SPINT3P49223 89 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 HTR6P50406 440 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 PSME3P61289 254 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 YBX1P67809 324 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 DHCR24Q15392 516 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 AAGABQ6PD74 315 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GPRIN3Q6ZVF9 776 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 DET1Q7L5Y6 550 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GOLGA7Q7Z5G4 137 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ADAMTSL2Q86TH1 951 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 OR56A4Q8NGH8 313 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 ZFYVE19Q96K21 471 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 TEX37Q96LM6 180 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
VRK3-217ENST00000599538 GMPR2Q9P2T1 348 aaKnown RBP14.26□□□□□ -0.13
VRK3-217ENST00000599538 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 OR7A17O14581 309 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 MLYCDO95822 493 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 HNRNPA1P09651 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
VRK3-217ENST00000599538 LBPP18428 481 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 CCR7P32248 378 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 UBE3AQ05086 875 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 STX5Q13190 355 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 ZRSR2Q15696 482 aaKnown RBP14.25□□□□□ -0.13
VRK3-217ENST00000599538 LRRC36Q1X8D7 754 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 TMC5Q6UXY8 1006 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 HSD11B1LQ7Z5J1 315 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 MYO1HQ8N1T3 1032 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 RSRC1Q96IZ7 334 aaKnown RBP14.25□□□□□ -0.13
VRK3-217ENST00000599538 ZDHHC3Q9NYG2 299 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 ADA2Q9NZK5 511 aa14.25□□□□□ -0.13
VRK3-217ENST00000599538 PTBP2Q9UKA9 531 aaKnown RBP14.25□□□□□ -0.13
VRK3-217ENST00000599538 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 NR5A2O00482 541 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 MRASO14807 208 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 NRP2O60462 931 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 KATNA1O75449 491 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 CYP17A1P05093 508 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 PRR35P0CG20 571 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 UROSP10746 265 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 CAPN3P20807 821 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ATP6V1C1P21283 382 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 DGKAP23743 735 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ARL1P40616 181 aaPredicted RBP14.24□□□□□ -0.13
VRK3-217ENST00000599538 ATP4BP51164 291 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 RALGDSQ12967 914 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 PCBP2Q15366 365 aaKnown RBP eCLIP14.24□□□□□ -0.13
VRK3-217ENST00000599538 VPS26BQ4G0F5 336 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 XKR7Q5GH72 579 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 LYPLAL1Q5VWZ2 237 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 AHI1Q8N157 1196 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 PDPRQ8NCN5 879 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 JADE3Q92613 823 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 SERPINI1Q99574 410 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 COPS8Q99627 209 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 TMEM79Q9BSE2 394 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 SPATS2LQ9NUQ6 558 aaKnown RBP14.24□□□□□ -0.13
VRK3-217ENST00000599538 MARK1Q9P0L2 795 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 ST14Q9Y5Y6 855 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 KRT87PA6NCN2 255 aa14.24□□□□□ -0.13
VRK3-217ENST00000599538 OTOL1A6NHN0 477 aaPredicted RBP14.24□□□□□ -0.13
VRK3-217ENST00000599538 CISD3P0C7P0 127 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms