RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ARHGEF17Q96PE2 2063 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 CXorf49A8MYA2 514 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 NDUFS3O75489 264 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 PIAS1O75925 651 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 PPARGP37231 505 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 ADARP55265 1226 aaKnown RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 DMPKQ09013 629 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 ILF3Q12906 894 aaKnown RBP eCLIP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 NAA30Q147X3 362 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 KYNUQ16719 465 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 DEFB133Q30KQ1 61 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 ZNF449Q6P9G9 518 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 CCNI2Q6ZMN8 369 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 FAM83HQ6ZRV2 1179 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 GALNT7Q86SF2 657 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 SFTPA2Q8IWL1 248 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 SDR16C5Q8N3Y7 309 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 OR4C6Q8NH72 309 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 NETO1Q8TDF5 533 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 GSDMCQ9BYG8 508 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 TAAR2Q9P1P5 351 aa17.7■□□□□ 0.42
COMMD4-222ENST00000568034 DNMT3AQ9Y6K1 912 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-222ENST00000568034 A6NCN8 305 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 FAM159BA6NKW6 160 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 IQCF5A8MTL0 148 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 TPP1O14773 563 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 FFAR2O15552 330 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 FLRT2O43155 660 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 SPAG6O75602 509 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 EML2O95834 649 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 PBLDP30039 288 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 ACTR1BP42025 376 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 LEPRP48357 1165 aaKnown RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 EIF3BP55884 814 aaKnown RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 ACTR1AP61163 376 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 INSCQ1MX18 579 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 WDR93Q6P2C0 686 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 ZNF549Q6P9A3 640 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 CNSTQ6PJW8 725 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 SLC30A9Q6PML9 568 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 KIAA0408Q6ZU52 694 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 TAF8Q7Z7C8 310 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 PIP4P1Q86T03 277 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 LRRC6Q86X45 466 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 GKN2Q86XP6 184 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 LILRA3Q8N6C8 439 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 OR2L2Q8NH16 312 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 BAHD1Q8TBE0 780 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 MCMBPQ9BTE3 642 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 PPANQ9NQ55 473 aaKnown RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 KLC4Q9NSK0 619 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 SPATS2LQ9NUQ6 558 aaKnown RBP17.69■□□□□ 0.42
COMMD4-222ENST00000568034 NLGN3Q9NZ94 848 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 CRYL1Q9Y2S2 319 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 MED16Q9Y2X0 877 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
COMMD4-222ENST00000568034 LY6G6EA0A0G2JKS1 128 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 UBA6A0AVT1 1052 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-222ENST00000568034 MGAT4DA6NG13 374 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 QSOX1O00391 747 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 TM4SF5O14894 197 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 SH3BP5O60239 455 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 CBFA2T3O75081 653 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 HAUS5O94927 633 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 ANXA6P08133 673 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 GRK6P43250 576 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 NFE2L1Q14494 772 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 SLMAPQ14BN4 828 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 SUZ12Q15022 739 aaKnown RBP17.68■□□□□ 0.42
COMMD4-222ENST00000568034 C6orf132Q5T0Z8 1188 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 LVRNQ6Q4G3 990 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 AMZ2Q86W34 360 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 NAXDQ8IW45 347 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 EID2Q8N6I1 236 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 FBF1Q8TES7 1133 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 CAMK1GQ96NX5 476 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 EPB41L4BQ9H329 900 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 VPS37BQ9H9H4 285 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 TBC1D29Q9UFV1 150 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 PCOLCE2Q9UKZ9 415 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 DNAJC16Q9Y2G8 782 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 PCDHB1Q9Y5F3 818 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 U3KQA8 63 aa17.68■□□□□ 0.42
COMMD4-222ENST00000568034 COL5A1P20908 1838 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-222ENST00000568034 NEMP2A6NFY4 417 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 SIGLEC6O43699 453 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 NOBOXO60393 691 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 AHSGP02765 367 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 ESR1P03372 595 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 OR56A5P0C7T3 313 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 FMO4P31512 558 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 ABCG1P45844 678 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 EFTUD2Q15029 972 aaKnown RBP eCLIP17.67■□□□□ 0.421e-7■■■■■ 52.3
COMMD4-222ENST00000568034 OGFOD3Q6PK18 319 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 C17orf82Q86X59 251 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-222ENST00000568034 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 HM13Q8TCT9 377 aa17.67■□□□□ 0.42
COMMD4-222ENST00000568034 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms