RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NVLO15381 856 aaKnown RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 PRAMEF10O60809 474 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 GAS8O95995 478 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 XRCC1P18887 633 aaPredicted RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 ITGALP20701 1170 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 MSNP26038 577 aaKnown RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 RPL10P27635 214 aaKnown RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 MC4RP32245 332 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 SLC19A1P41440 591 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 SEPT7Q16181 437 aaKnown RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 TMEM220Q6QAJ8 160 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 ABRAXAS1Q6UWZ7 409 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 SNX20Q7Z614 316 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 JAMLQ86YT9 394 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 NAT14Q8WUY8 206 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 CCDC97Q96F63 343 aaPredicted RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 FCRL3Q96P31 734 aaPredicted RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 CPNE5Q9HCH3 593 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 NLE1Q9NVX2 485 aaPredicted RBP24.72■■□□□ 1.55
FANCA-228ENST00000567943 FOXJ2Q9P0K8 574 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 WDR37Q9Y2I8 494 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 SLC30A1Q9Y6M5 507 aa24.72■■□□□ 1.55
FANCA-228ENST00000567943 USP27XA6NNY8 438 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 AGAP14A8MT82 685 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 PDZK1P1A8MUH7 402 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 HGSO14964 777 aaPredicted RBP24.71■■□□□ 1.55
FANCA-228ENST00000567943 FGF3P11487 239 aaPredicted RBP24.71■■□□□ 1.55
FANCA-228ENST00000567943 VCLP18206 1134 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 ARSDP51689 593 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 DRG2P55039 364 aaKnown RBP24.71■■□□□ 1.55
FANCA-228ENST00000567943 KCTD19Q17RG1 926 aaPredicted RBP24.71■■□□□ 1.55
FANCA-228ENST00000567943 CCDC38Q502W7 563 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 DET1Q7L5Y6 550 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 OR10G6Q8NH81 332 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 STYXQ8WUJ0 223 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 USP7Q93009 1102 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 PMEPA1Q969W9 287 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 ULK4Q96C45 1275 aa24.71■■□□□ 1.55
FANCA-228ENST00000567943 STN1Q9H668 368 aaKnown RBP24.71■■□□□ 1.55
FANCA-228ENST00000567943 SGTAO43765 313 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 DUX1O43812 170 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 POP7O75817 140 aaKnown RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 MAPK10P53779 464 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 EPHA4P54764 986 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 CXADRP78310 365 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 BASP1P80723 227 aaKnown RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 TRA2AQ13595 282 aaKnown RBP eCLIP24.7■■□□□ 1.54
FANCA-228ENST00000567943 CLCA4Q14CN2 919 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 ZRANB3Q5FWF4 1079 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 FNBP1LQ5T0N5 605 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 AGAP9Q5VTM2 703 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 WDR74Q6RFH5 385 aaPredicted RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 XKR5Q6UX68 686 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 C4orf22Q6V702 233 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 WASH2PQ6VEQ5 465 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 FAM83HQ6ZRV2 1179 aaPredicted RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 AMZ2Q86W34 360 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 NXPE1Q8N323 547 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 COG1Q8WTW3 980 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 SH3KBP1Q96B97 665 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 SGF29Q96ES7 293 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 AHCYL2Q96HN2 611 aaKnown RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 CDKN2AIPNLQ96HQ2 116 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 OSBPL9Q96SU4 736 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 DPYSL5Q9BPU6 564 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 AP1M1Q9BXS5 423 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 CASS4Q9NQ75 786 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 WASH6PQ9NQA3 447 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 SMARCAL1Q9NZC9 954 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 OGFRQ9NZT2 677 aa24.7■■□□□ 1.54
FANCA-228ENST00000567943 TTC7AQ9ULT0 858 aaPredicted RBP24.7■■□□□ 1.54
FANCA-228ENST00000567943 MROH6A6NGR9 719 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 OR52A4PA6NMU1 304 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 H7C0S8 307 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 IDSP22304 550 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 DMPKQ09013 629 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 TGIF1Q15583 401 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 BEND7Q8N7W2 519 aaPredicted RBP24.69■■□□□ 1.54
FANCA-228ENST00000567943 MAGOHBQ96A72 148 aaKnown RBP24.69■■□□□ 1.54
FANCA-228ENST00000567943 DCUN1D1Q96GG9 259 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 ZNF514Q96K75 400 aaPredicted RBP24.69■■□□□ 1.54
FANCA-228ENST00000567943 UCK1Q9HA47 277 aa24.69■■□□□ 1.54
FANCA-228ENST00000567943 LILRA5A6NI73 299 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 PGRMC1O00264 195 aaKnown RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 KCNJ13O60928 360 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 PRSS56P0CW18 603 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 PBLDP30039 288 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 PPM1FP49593 454 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 CDKN1CP49918 316 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 TRIP13Q15645 432 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 SKIDA1Q1XH10 827 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 GPR33Q49SQ1 333 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 TTC27Q6P3X3 843 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 TMEM26Q6ZUK4 368 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 ARHGAP22Q7Z5H3 698 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 NCSTNQ92542 709 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 NAP1L3Q99457 506 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 COPS8Q99627 209 aa24.68■■□□□ 1.54
FANCA-228ENST00000567943 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.68■■□□□ 1.54
FANCA-228ENST00000567943 EIF2B3Q9NR50 452 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms