RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 KLHL33A6NCF5 533 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 OR2AG2A6NM03 316 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 OR52A4PA6NMU1 304 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 EFCAB7A8K855 629 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AGRPO00253 132 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TOX3O15405 576 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 DDX3YO15523 660 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 GPR39O43194 453 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 EFSO43281 561 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 BUD23O43709 281 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A9O60656 530 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 POP7O75817 140 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 C1QL1O75973 258 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SRP72O76094 671 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 UBXN7O94888 489 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 PRAMEF1O95521 474 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 CRTAMO95727 393 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 FTCDO95954 541 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AGTP01019 485 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 C9P02748 559 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ANKRD34CP0C6C1 535 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 RALBP11234 206 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 CCL4P13236 92 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 BRAFP15056 766 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AMD1P17707 334 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A6P19224 532 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 MSH3P20585 1137 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A1P22309 533 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A4P22310 534 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 MPSTP25325 297 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 RPL10P27635 214 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 AKT1P31749 480 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A3P35503 534 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 HADHAP40939 763 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SLC19A1P41440 591 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 MAPK9P45984 424 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 CAPZBP47756 277 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ATP1A2P50993 1020 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ARSDP51689 593 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 MC2RQ01718 297 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 C19orf57Q0VDD7 668 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 KLF1Q13351 362 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 TGIF1Q15583 401 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SEPT7Q16181 437 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 LONRF2Q1L5Z9 754 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 PARP6Q2NL67 630 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 P3H1Q32P28 736 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TAF1BQ53T94 588 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 SNAP47Q5SQN1 464 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 GPRC6AQ5T6X5 926 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AADACL2Q6P093 401 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ARHGEF18Q6ZSZ5 1173 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TMEM26Q6ZUK4 368 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ARHGAP22Q7Z5H3 698 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 AMZ2Q86W34 360 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ZFAND4Q86XD8 727 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 FAM129CQ86XR2 697 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 RNF10Q8N5U6 811 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 RASGEF1AQ8N9B8 481 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SPC24Q8NBT2 197 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 OR4K2Q8NGD2 314 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ZNF398Q8TD17 642 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TTC9Q92623 222 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ART4Q93070 314 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 CXorf40BQ96DE9 158 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SGF29Q96ES7 293 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 HES6Q96HZ4 224 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ZNF514Q96K75 400 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 TEFMQ96QE5 360 aaKnown RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TBL1YQ9BQ87 522 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ZPBPQ9BS86 351 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 DESI2Q9BSY9 194 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TBC1D10AQ9BXI6 508 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 TSGA10Q9BZW7 698 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A7Q9HAW7 530 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A10Q9HAW8 530 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 UGT1A8Q9HAW9 530 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 ARNT2Q9HBZ2 717 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SLC40A1Q9NP59 571 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 FBXO8Q9NRD0 319 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 OCIAD1Q9NX40 245 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SLC39A1Q9NY26 324 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 SCHIP1Q9P0W5 487 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 ZNF624Q9P2J8 865 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 TRIM10Q9UDY6 481 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 PACSIN2Q9UNF0 486 aaPredicted RBP4.7□□□□□ -1.66
CLK3-219ENST00000567805 B3GALT1Q9Y5Z6 326 aa4.7□□□□□ -1.66
CLK3-219ENST00000567805 GCN1Q92616 2671 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 A0A0U1RQJ8 604 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 MGAT4DA6NG13 374 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 A8MU76 341 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 H7C0S8 307 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 POLR1CO15160 346 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 CAPN5O15484 640 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms