RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMEM159Q96B96 161 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 DPYSL5Q9BPU6 564 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 TBC1D10AQ9BXI6 508 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 ASCL3Q9NQ33 180 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 POT1Q9NUX5 634 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 KLHL3Q9UH77 587 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 TTC7AQ9ULT0 858 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 DNMT3AQ9Y6K1 912 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 ACACAQ13085 2346 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 URB1O60287 2271 aaKnown RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 A0A087WV48 116 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 MGAT4DA6NG13 374 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 PGRMC1O00264 195 aaKnown RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 SUN1O94901 812 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 POLBP06746 335 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC35G4P0C7Q5 338 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRSS56P0CW18 603 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 BRAFP15056 766 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 TYRP1P17643 537 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ADRA1DP25100 572 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ITPKBP27987 946 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 CSF2RBP32927 897 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 LIMK2P53671 638 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRAMEP78395 509 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 CACNG1Q06432 222 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 KRT33BQ14525 404 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 COL28A1Q2UY09 1125 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 BROXQ5VW32 411 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMEM71Q6P5X7 295 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ABRAXAS1Q6UWZ7 409 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF574Q6ZN55 896 aaPredicted RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 FAM83HQ6ZRV2 1179 aaPredicted RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 MICALCLQ6ZW33 695 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 CFAP206Q8IYR0 622 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 PPHLN1Q8NEY8 458 aaKnown RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 OR6P1Q8NGX9 317 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 OR2L2Q8NH16 312 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 KCNE4Q8WWG9 221 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 OSBPL9Q96SU4 736 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 TTC1Q99614 292 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 VPS37BQ9H9H4 285 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 IMP3Q9NV31 184 aaKnown RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZDHHC3Q9NYG2 299 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 SMARCAL1Q9NZC9 954 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF624Q9P2J8 865 aaPredicted RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 WDR37Q9Y2I8 494 aa12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 CFAP20Q9Y6A4 193 aaKnown RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 KMT2BQ9UMN6 2715 aaPredicted RBP12.73□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZZEF1O43149 2961 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 APC2O95996 2303 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 KLHL33A6NCF5 533 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 MROH6A6NGR9 719 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 OR51F1A6NGY5 319 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 H7C0S8 307 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 HGSO14964 777 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 KLK10O43240 276 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 UBXN7O94888 489 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 ACRV1P26436 265 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC5A2P31639 672 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 MLLT3P42568 568 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 ARSDP51689 593 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 EPHA4P54764 986 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 DMPKQ09013 629 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 GPS1Q13098 491 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 GPR18Q14330 331 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 CLCA4Q14CN2 919 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 C16orf72Q14CZ0 275 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMEM164Q5U3C3 297 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 AGAP9Q5VTM2 703 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF449Q6P9G9 518 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 WASH2PQ6VEQ5 465 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 RBM12BQ8IXT5 1001 aaKnown RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 RASGEF1CQ8N431 466 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 AGBL5Q8NDL9 886 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 HDAC10Q969S8 669 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRR11Q96HE9 360 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 C12orf66Q96MD2 445 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 WWP1Q9H0M0 922 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 WASH6PQ9NQA3 447 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms