RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TPSAB1Q15661 275 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CYP1B1Q16678 543 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CLPPQ16740 277 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 AMZ1Q400G9 498 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC38Q502W7 563 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 FNBP1LQ5T0N5 605 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CERCAMQ5T4B2 595 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TSTD2Q5T7W7 516 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PAPD7Q5XG87 772 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 KCTD16Q68DU8 428 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 LRRC8BQ6P9F7 803 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CERS6Q6ZMG9 384 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 SYDE1Q6ZW31 735 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 DET1Q7L5Y6 550 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PRUNE1Q86TP1 453 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 NRROSQ86YC3 692 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 LSMEM2Q8N112 164 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 NXPE1Q8N323 547 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 ARL14Q8N4G2 192 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 OR10G6Q8NH81 332 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PEX13Q92968 403 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CXorf40BQ96DE9 158 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 DPYSL5Q9BPU6 564 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 LRRN3Q9H3W5 708 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CAAP1Q9H8G2 361 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 XAB2Q9HCS7 855 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CASS4Q9NQ75 786 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 ZDHHC3Q9NYG2 299 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 KCNK4Q9NYG8 393 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 RIMKLBQ9ULI2 386 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TCAF1Q9Y4C2 921 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PLEKHM1Q9Y4G2 1056 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 KNL1Q8NG31 2342 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 DOCK9Q9BZ29 2069 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 MAGEB16A2A368 324 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 IFRD1O00458 451 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 DUX1O43812 170 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 CSO75390 466 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 AP2A2O94973 939 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 FTH1P02794 183 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 GSTM1P09488 218 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SLC35G4P0C7Q5 338 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 OR56A5P0C7T3 313 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ATP1B2P14415 290 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ACRV1P26436 265 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 RBMS1P29558 406 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 NSG1P42857 185 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 INHBCP55103 352 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 GPLD1P80108 840 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 XIAPP98170 497 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 DR1Q01658 176 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 GSTM4Q03013 218 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ITIH4Q14624 930 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ARMC3Q5W041 872 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 IYDQ6PHW0 289 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SDCCAG8Q86SQ7 713 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 PIM3Q86V86 326 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SERPINA9Q86WD7 417 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 KLHL7Q8IXQ5 586 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 RBM12BQ8IXT5 1001 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 PPIL6Q8IXY8 311 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 NAGSQ8N159 534 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 DCBLD1Q8N8Z6 715 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 RASGEF1AQ8N9B8 481 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 GLIS1Q8NBF1 620 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 OR4L1Q8NH43 312 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 GSDMBQ8TAX9 411 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 HDAC10Q969S8 669 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 EPB41L1Q9H4G0 881 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ALG2Q9H553 416 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 FAM96AQ9H5X1 160 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SARS2Q9NP81 518 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 POT1Q9NUX5 634 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 TBC1D29Q9UFV1 150 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 ACSL5Q9ULC5 683 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 U3KQA8 63 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 CABIN1Q9Y6J0 2220 aa8.19□□□□□ -1.1
PSEN1-223ENST00000557511 CNOT1A5YKK6 2376 aaKnown RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 TP53BP1Q12888 1972 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-223ENST00000557511 TRABD2BA6NFA1 517 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MGAT4DA6NG13 374 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 SDR42E2A6NKP2 422 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CCL22O00626 93 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 KDM1AO60341 852 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 NDUFS3O75489 264 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 CPNE6O95741 557 aa8.18□□□□□ -1.1
PSEN1-223ENST00000557511 GOT2P00505 430 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms