RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NKAIN2Q5VXU1 208 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 TMEM71Q6P5X7 295 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 WDR74Q6RFH5 385 aaPredicted RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 ZNF574Q6ZN55 896 aaPredicted RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 USP53Q70EK8 1073 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 GSTA5Q7RTV2 222 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 PRUNE1Q86TP1 453 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 ZNF761Q86XN6 746 aaPredicted RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 CDKN2AIPNLQ96HQ2 116 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 CCDC74BQ96LY2 380 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 NAP1L3Q99457 506 aaPredicted RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 CASS4Q9NQ75 786 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 PIH1D1Q9NWS0 290 aaKnown RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 ZDHHC3Q9NYG2 299 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 TTC7AQ9ULT0 858 aaPredicted RBP15.61■□□□□ 0.09
DDX54-204ENST00000546898 AHCTF1Q8WYP5 2266 aa15.61■□□□□ 0.09
DDX54-204ENST00000546898 IGLV3-16A0A075B6K0 115 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 PMS2P1A4D2B8 440 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 MGAT4DA6NG13 374 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 AP3B1O00203 1094 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 CCL22O00626 93 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 KIF5CO60282 957 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 APRTP07741 180 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 ACRV1P26436 265 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 RPL10P27635 214 aaKnown RBP15.6■□□□□ 0.09
DDX54-204ENST00000546898 SLC19A1P41440 591 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 PPM1FP49593 454 aaPredicted RBP15.6■□□□□ 0.09
DDX54-204ENST00000546898 PRLHRP49683 370 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 DRG2P55039 364 aaKnown RBP15.6■□□□□ 0.09
DDX54-204ENST00000546898 CACNG1Q06432 222 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 C16orf72Q14CZ0 275 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 ZRANB3Q5FWF4 1079 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 TMEM26Q6ZUK4 368 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 DET1Q7L5Y6 550 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 NLRP9Q7RTR0 991 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 PRELID2Q8N945 189 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 OR2L2Q8NH16 312 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 PEX13Q92968 403 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 CXorf40BQ96DE9 158 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 SGF29Q96ES7 293 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 CCDC97Q96F63 343 aaPredicted RBP15.6■□□□□ 0.09
DDX54-204ENST00000546898 B3GNT4Q9C0J1 378 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 ZNF624Q9P2J8 865 aaPredicted RBP15.6■□□□□ 0.09
DDX54-204ENST00000546898 PDP2Q9P2J9 529 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 PISDQ9UG56 409 aa15.6■□□□□ 0.09
DDX54-204ENST00000546898 ZSCAN5DPP0CG00 497 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 HGFP14210 728 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 ATP1B2P14415 290 aaPredicted RBP15.59■□□□□ 0.09
DDX54-204ENST00000546898 ADRA1DP25100 572 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 BASP1P80723 227 aaKnown RBP15.59■□□□□ 0.09
DDX54-204ENST00000546898 CFHR1Q03591 330 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 NFE2L1Q14494 772 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 ITIH4Q14624 930 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 COL28A1Q2UY09 1125 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 METRNLQ641Q3 311 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 SERPINA9Q86WD7 417 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 SLC35F6Q8N357 371 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 BEND7Q8N7W2 519 aaPredicted RBP15.59■□□□□ 0.09
DDX54-204ENST00000546898 HM13Q8TCT9 377 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 HNRNPLLQ8WVV9 542 aaKnown RBP15.59■□□□□ 0.09
DDX54-204ENST00000546898 KCNE4Q8WWG9 221 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.59■□□□□ 0.097e-8■■■■□ 26.2
DDX54-204ENST00000546898 DPH1Q9BZG8 443 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 FAM96AQ9H5X1 160 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 VPS37BQ9H9H4 285 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 ACSL6Q9UKU0 697 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 ACSL5Q9ULC5 683 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
DDX54-204ENST00000546898 C17orf113A0A1B0GUU1 675 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 OR52A4PA6NMU1 304 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 PGRMC1O00264 195 aaKnown RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 QSOX1O00391 747 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 CES2O00748 559 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 NVLO15381 856 aaKnown RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 SGTAO43765 313 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 GSTM1P09488 218 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 HOXB3P14651 431 aaPredicted RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 TPSB2P20231 275 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 PBLDP30039 288 aaPredicted RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 GRIA1P42261 906 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 KCNJ1P48048 391 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 CDK16Q00536 496 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 GSTM4Q03013 218 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 ACVR1Q04771 509 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 CCDC173Q0VFZ6 552 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 CLCA4Q14CN2 919 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 TPSAB1Q15661 275 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 CCDC38Q502W7 563 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 TSTD2Q5T7W7 516 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 C19orf48Q6RUI8 117 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 FAM83HQ6ZRV2 1179 aaPredicted RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 TAS2R42Q7RTR8 314 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 AGBL5Q8NDL9 886 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 RCBTB1Q8NDN9 531 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 PPHLN1Q8NEY8 458 aaKnown RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 OR13J1Q8NGT2 312 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 TBC1D10AQ9BXI6 508 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 SLC40A1Q9NP59 571 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 TMEM9Q9P0T7 183 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 WDR37Q9Y2I8 494 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms