RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SEL1L2Q5TEA6 688 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 ARHGAP22Q7Z5H3 698 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 BMPERQ8N8U9 685 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 ZNF398Q8TD17 642 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 NCSTNQ92542 709 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 ART4Q93070 314 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 CXorf40BQ96DE9 158 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 TBC1D10AQ9BXI6 508 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 SLC40A1Q9NP59 571 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 FKBPLQ9UIM3 349 aa15.44■□□□□ 0.06
HDAC4-213ENST00000496347 R3HDM2Q9Y2K5 976 aaKnown RBP15.44■□□□□ 0.06
HDAC4-213ENST00000496347 OR2AG2A6NM03 316 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 OR52A4PA6NMU1 304 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 EFCAB7A8K855 629 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 AGAP14A8MT82 685 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 TOX3O15405 576 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A9O60656 530 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 AP2A1O95782 977 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 C9P02748 559 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 RALBP11234 206 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A6P19224 532 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A1P22309 533 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A4P22310 534 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A3P35503 534 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ATP1A2P50993 1020 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 DRG2P55039 364 aaKnown RBP15.43■□□□□ 0.06
HDAC4-213ENST00000496347 BCL7AQ4VC05 210 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 MANEAQ5SRI9 462 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 DCAF12Q5T6F0 453 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 DENND5AQ6IQ26 1287 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ZFAND4Q86XD8 727 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 SLC39A7Q92504 469 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 PMEPA1Q969W9 287 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ZPBPQ9BS86 351 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 TMEM121Q9BTD3 319 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ASB8Q9H765 288 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A7Q9HAW7 530 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A10Q9HAW8 530 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 UGT1A8Q9HAW9 530 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 SLC39A1Q9NY26 324 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 CRLS1Q9UJA2 301 aa15.43■□□□□ 0.06
HDAC4-213ENST00000496347 ERI2A8K979 691 aaKnown RBP15.42■□□□□ 0.06
HDAC4-213ENST00000496347 CFAP99D6REC4 459 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 LDB2O43679 373 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 POP7O75817 140 aaKnown RBP15.42■□□□□ 0.06
HDAC4-213ENST00000496347 GDF10P55107 478 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 XIAPP98170 497 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 GPR18Q14330 331 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 PTPRCAPQ14761 206 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 TGIF1Q15583 401 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 SNAP47Q5SQN1 464 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 FNBP1LQ5T0N5 605 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 SNX20Q7Z614 316 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 NXPE1Q8N323 547 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 HEXDCQ8WVB3 486 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 TTC9Q92623 222 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 DCUN1D1Q96GG9 259 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 LINC00615Q96LM1 132 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-213ENST00000496347 OGFRQ9NZT2 677 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 WDR37Q9Y2I8 494 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 B3GALT1Q9Y5Z6 326 aa15.42■□□□□ 0.06
HDAC4-213ENST00000496347 TCRBV7S2A1N4TA0A589 114 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 MGAT4DA6NG13 374 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 H7C0S8 307 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 PSMD3O43242 534 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 LIASO43766 372 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 METTL18O95568 372 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 STIP1P31948 543 aaKnown RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 CA5AP35218 305 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 PRLHRP49683 370 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 ARSDP51689 593 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 GFERP55789 205 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 MC2RQ01718 297 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 NFE2L1Q14494 772 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 SPARCL1Q14515 664 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 CLCA4Q14CN2 919 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 OASLQ15646 514 aaKnown RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 GPR33Q49SQ1 333 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 TAF1BQ53T94 588 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 METRNLQ641Q3 311 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 TMEM220Q6QAJ8 160 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 PCSK4Q6UW60 755 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 CEACAM20Q6UY09 585 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 ZNF662Q6ZS27 426 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 PRSS42Q7Z5A4 293 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 LINC00523Q86TU6 105 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 BEND7Q8N7W2 519 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 OR13C4Q8NGS5 318 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 OR2L2Q8NH16 312 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 ATG4AQ8WYN0 398 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 SGF29Q96ES7 293 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 DNAJC1Q96KC8 554 aaKnown RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 C9orf72Q96LT7 481 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 COPS8Q99627 209 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 ZNF768Q9H5H4 540 aaKnown RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 FBXO8Q9NRD0 319 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 OCIAD1Q9NX40 245 aa15.41■□□□□ 0.06
HDAC4-213ENST00000496347 SIDT1Q9NXL6 827 aaKnown RBP15.41■□□□□ 0.06
HDAC4-213ENST00000496347 ACSL5Q9ULC5 683 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms