RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 AGAP9Q5VTM2 703 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 CLEC14AQ86T13 490 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 SPACA3Q8IXA5 215 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 RASGEF1CQ8N431 466 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 DNAAF3Q8N9W5 541 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 OR13J1Q8NGT2 312 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 COG1Q8WTW3 980 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 LRRC45Q96CN5 670 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 AP1M1Q9BXS5 423 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 ZCCHC2Q9C0B9 1178 aaKnown RBP17.79■□□□□ 0.44
COL9A3-214ENST00000490398 THSD1Q9NS62 852 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 JRKLQ9Y4A0 524 aa17.79■□□□□ 0.44
COL9A3-214ENST00000490398 A8MU76 341 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 E7EVH7 732 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 APRTP07741 180 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 ITGA2BP08514 1039 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 THRAP10827 490 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 SLC2A4P14672 509 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 TYRP1P17643 537 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 SLC5A2P31639 672 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 PCBP4P57723 403 aaKnown RBP17.78■□□□□ 0.44
COL9A3-214ENST00000490398 GPLD1P80108 840 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 DBN1Q16643 649 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 SNAP47Q5SQN1 464 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 DUS1LQ6P1R4 473 aaKnown RBP17.78■□□□□ 0.44
COL9A3-214ENST00000490398 TMEM71Q6P5X7 295 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 WASH2PQ6VEQ5 465 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 PPP1R21Q6ZMI0 780 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 LINC00523Q86TU6 105 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 CLDN19Q8N6F1 224 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 OR4D9Q8NGE8 314 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 STYXQ8WUJ0 223 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 NCSTNQ92542 709 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 COPS8Q99627 209 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 C19orf43Q9BQ61 176 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 WASH6PQ9NQA3 447 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 ZDHHC3Q9NYG2 299 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 FOXJ2Q9P0K8 574 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 ZKSCAN5Q9Y2L8 839 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 PRSS21Q9Y6M0 314 aa17.78■□□□□ 0.44
COL9A3-214ENST00000490398 ADAMTS20P59510 1910 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 IGLV3-16A0A075B6K0 115 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 ERI2A8K979 691 aaKnown RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 C9orf172C9J069 976 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 DUX1O43812 170 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 VIPP01282 170 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 JMJD7P0C870 316 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 ACRV1P26436 265 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 PPM1FP49593 454 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 MAPK10P53779 464 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 GFERP55789 205 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 CRADDP78560 199 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 TLE3Q04726 772 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 EIF3IQ13347 325 aaKnown RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 GPR18Q14330 331 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 RPE65Q16518 533 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 CLPPQ16740 277 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 BCL7AQ4VC05 210 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 METRNLQ641Q3 311 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 TMEM26Q6ZUK4 368 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 TAS2R42Q7RTR8 314 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 GSTA5Q7RTV2 222 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 JAMLQ86YT9 394 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 TRIM48Q8IWZ4 208 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 ZNF248Q8NDW4 579 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 OR10G6Q8NH81 332 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 MAIP1Q8WWC4 291 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 USP7Q93009 1102 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 SH3KBP1Q96B97 665 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 ULK4Q96C45 1275 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 AHCYL2Q96HN2 611 aaKnown RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 INSM2Q96T92 566 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 WWP1Q9H0M0 922 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 SLC40A1Q9NP59 571 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 OCIAD1Q9NX40 245 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 PDP2Q9P2J9 529 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 KLHL3Q9UH77 587 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 CFAP20Q9Y6A4 193 aaKnown RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 DNMT3AQ9Y6K1 912 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-214ENST00000490398 MGAQ8IWI9 3026 aa17.77■□□□□ 0.44
COL9A3-214ENST00000490398 MGAT4DA6NG13 374 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 LILRA5A6NI73 299 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 ZNF185O15231 689 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 RRP8O43159 456 aaKnown RBP17.76■□□□□ 0.43
COL9A3-214ENST00000490398 PRAMEF10O60809 474 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 FGF3P11487 239 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-214ENST00000490398 ATP1B2P14415 290 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-214ENST00000490398 VCLP18206 1134 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 MSNP26038 577 aaKnown RBP17.76■□□□□ 0.43
COL9A3-214ENST00000490398 FOXN2P32314 431 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 ABCG1P45844 678 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 VPS41P49754 854 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 EPHA4P54764 986 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 TGIF1Q15583 401 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 GPR33Q49SQ1 333 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 ZNF658BQ4V348 819 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-214ENST00000490398 TSTD2Q5T7W7 516 aa17.76■□□□□ 0.43
COL9A3-214ENST00000490398 ZNF534Q76KX8 674 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms