RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KLF15Q9UIH9 416 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 SLC39A10Q9ULF5 831 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 MED16Q9Y2X0 877 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 SNX11Q9Y5W9 270 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 E5RI56 91 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 VPS26AO75436 327 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 KRT37O76014 449 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CSF2P04141 144 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CFIP05156 583 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SNRPAP09012 282 aaKnown RBP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 GSTM1P09488 218 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SAT1P21673 171 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CD9P21926 228 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 FDXRP22570 491 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 MPLP40238 635 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 BLKP51451 505 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 HK3P52790 923 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 TAS2R39P59534 338 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 TIAL1Q01085 375 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 GSTM4Q03013 218 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 USP10Q14694 798 aaKnown RBP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 PLA2G4EQ3MJ16 856 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 ZNF542PQ5EBM4 170 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SLC23A3Q6PIS1 610 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CHST15Q7LFX5 561 aaPredicted RBP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 PHACTR4Q8IZ21 702 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 RIBC1Q8N443 379 aaPredicted RBP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 FAM136AQ96C01 138 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 OLFM1Q99784 485 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 TIMM29Q9BSF4 260 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 VIPAS39Q9H9C1 493 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CAPN10Q9HC96 672 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 LATS2Q9NRM7 1088 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SPATS2LQ9NUQ6 558 aaKnown RBP17.29■□□□□ 0.36
CHMP3-207ENST00000485465 DNAJC28Q9NX36 388 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 TAS2R13Q9NYV9 303 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 GALPQ9UBC7 116 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SLC23A2Q9UGH3 650 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 SLC6A14Q9UN76 642 aa17.29■□□□□ 0.36
CHMP3-207ENST00000485465 CUL9Q8IWT3 2517 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 C17orf113A0A1B0GUU1 675 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 PATE3B3GLJ2 98 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 TRIM49D1C9J1S8 452 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 SCAMP1O15126 338 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 RETP07949 1114 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 JUNDP17535 347 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 PBLDP30039 288 aaPredicted RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 CCR7P32248 378 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 NBL1P41271 181 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 CLCN7P51798 805 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 ARHGAP8P85298 464 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 TMED2Q15363 201 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 KRT71Q3SY84 523 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 ZNF658BQ4V348 819 aaPredicted RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 TRIM61Q5EBN2 209 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 UGT3A1Q6NUS8 523 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 CROCCP2Q86T23 111 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 AMZ2Q86W34 360 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 OXR1Q8N573 874 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 OR2L2Q8NH16 312 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 ELMO1Q92556 727 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 MTBPQ96DY7 904 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 GPR21Q99679 349 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 SLC13A1Q9BZW2 595 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 TCEAL2Q9H3H9 227 aaPredicted RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 CAB39LQ9H9S4 337 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 SARS2Q9NP81 518 aaKnown RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 ZNF446Q9NWS9 450 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 TRNAU1APQ9NX07 287 aaKnown RBP17.28■□□□□ 0.36
CHMP3-207ENST00000485465 KLHL42Q9P2K6 505 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 LGALS13Q9UHV8 139 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 DHRS7Q9Y394 339 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 PLEKHM1Q9Y4G2 1056 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 SPAG17Q6Q759 2223 aa17.28■□□□□ 0.36
CHMP3-207ENST00000485465 WDFY4Q6ZS81 3184 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 KLHL33A6NCF5 533 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 MAP2K7O14733 419 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 KPNA5O15131 536 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 KCNJ13O60928 360 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 ACP5P13686 325 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 AOAHP28039 575 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 SKIV2L2P42285 1042 aaKnown RBP17.27■□□□□ 0.36
CHMP3-207ENST00000485465 SLC12A2P55011 1212 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 GRIK2Q13002 908 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 DNAJC3Q13217 504 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 LRP8Q14114 963 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 INSCQ1MX18 579 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 PLA2G2CQ5R387 149 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 PRAMEF14Q5SWL7 426 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 TIFABQ6ZNK6 161 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 OTOAQ7RTW8 1153 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 PIM3Q86V86 326 aa17.27■□□□□ 0.36
CHMP3-207ENST00000485465 CEP97Q8IW35 865 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms