RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 C9orf43Q8TAL5 461 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 DTX3LQ8TDB6 740 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 RSC1A1Q92681 617 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 MRGPRX2Q96LB1 330 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 PPP1R2P1Q96PQ5 205 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 OR6C1Q96RD1 312 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 PDE7BQ9NP56 450 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 SLC40A1Q9NP59 571 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 IL26Q9NPH9 171 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 SIDT1Q9NXL6 827 aaKnown RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 LNPEPQ9UIQ6 1025 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 RPS6KL1Q9Y6S9 549 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 OR2AG2A6NM03 316 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 APOC4-APOC2K7ER74 178 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 POP7O75817 140 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 ZNF189O75820 626 aaPredicted RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 NDUFA10O95299 355 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 APOC2P02655 101 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 MT-ND3P03897 115 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 PTMAP06454 111 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 CCNYL3P0C7X3 344 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 PYGMP11217 842 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 RALBP11234 206 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 BRAFP15056 766 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 ITGB6P18564 788 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 DLSTP36957 453 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 CHRNA4P43681 627 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 LEPRP48357 1165 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 NAP1L1P55209 391 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 PDE1BQ01064 536 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 XRCC4Q13426 336 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 CHRNA6Q15825 494 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 GPRC6AQ5T6X5 926 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 ARMC6Q6NXE6 501 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 TMEM220Q6QAJ8 160 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 BBS12Q6ZW61 710 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 PPP1R3BQ86XI6 285 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 SIDT2Q8NBJ9 832 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 APOBEC4Q8WW27 367 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 OXNAD1Q96HP4 312 aaPredicted RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 ELMO2Q96JJ3 720 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 FICDQ9BVA6 458 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 HEMGNQ9BXL5 484 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 GBA3Q9H227 469 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 IMP3Q9NV31 184 aaKnown RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 IL17CQ9P0M4 197 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 IL17BQ9UHF5 180 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 KCND3Q9UK17 655 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 PSMD13Q9UNM6 376 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 PCDHA13Q9Y5I0 950 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
TTC28-203ENST00000442232 SLC30A1Q9Y6M5 507 aa11.55□□□□□ -0.56
TTC28-203ENST00000442232 PRR19A6NJB7 356 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 NKX2-8O15522 239 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 SUV39H1O43463 412 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 BUD23O43709 281 aaKnown RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A9O60656 530 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 KIAA0754O94854 1291 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 PRAMEF1O95521 474 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 SLC35G4P0C7Q5 338 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A6P19224 532 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 LPOP22079 712 aaPredicted RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A1P22309 533 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A4P22310 534 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 FECHP22830 423 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 MARCKSL1P49006 195 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 COPS2P61201 443 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 SH3BP2P78314 561 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 DMPKQ09013 629 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 TBX2Q13207 712 aaPredicted RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 TUBB3Q13509 450 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 KRT33BQ14525 404 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 DEFB109BQ30KR1 87 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 DET1Q7L5Y6 550 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 BEND7Q8N7W2 519 aaPredicted RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 RASGEF1AQ8N9B8 481 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 GALNT6Q8NCL4 622 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UBXN4Q92575 508 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 DCUN1D1Q96GG9 259 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 RAB33BQ9H082 229 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A7Q9HAW7 530 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A10Q9HAW8 530 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 UGT1A8Q9HAW9 530 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 SMOXQ9NWM0 555 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 EPHA6Q9UF33 1036 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 RARRES3Q9UL19 164 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 TMPRSS11EQ9UL52 423 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 AAR2Q9Y312 384 aaKnown RBP11.54□□□□□ -0.56
TTC28-203ENST00000442232 KCTD3Q9Y597 815 aa11.54□□□□□ -0.56
TTC28-203ENST00000442232 BOD1L1Q8NFC6 3051 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms