RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 OR13C4Q8NGS5 318 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 BBC3Q96PG8 261 aaPredicted RBP17.27■□□□□ 0.36
NUP50-208ENST00000430547 C19orf43Q9BQ61 176 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 FRMD8P1Q9BZ68 369 aaPredicted RBP17.27■□□□□ 0.36
NUP50-208ENST00000430547 ASPSCR1Q9BZE9 553 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 PDP2Q9P2J9 529 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 SSUH2Q9Y2M2 353 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 SLC30A1Q9Y6M5 507 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 PRR19A6NJB7 356 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 OR52A4PA6NMU1 304 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 B4E171 279 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 CFAP99D6REC4 459 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 K7ENP7 123 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 ATXN7O15265 892 aaPredicted RBP17.26■□□□□ 0.35
NUP50-208ENST00000430547 METTL18O95568 372 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 BRAFP15056 766 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 TYRP1P17643 537 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 TSPAN7P41732 249 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 ZNF140P52738 457 aaPredicted RBP17.26■□□□□ 0.35
NUP50-208ENST00000430547 DMPKQ09013 629 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 SEPT6Q14141 434 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 RPS6KA1Q15418 735 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 TAF1BQ53T94 588 aaPredicted RBP17.26■□□□□ 0.35
NUP50-208ENST00000430547 DCAF12Q5T6F0 453 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 DENND5AQ6IQ26 1287 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 INO80CQ6PI98 192 aaPredicted RBP17.26■□□□□ 0.35
NUP50-208ENST00000430547 ATG4AQ8WYN0 398 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 DDA1Q9BW61 102 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 LZTFL1Q9NQ48 299 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 OCIAD1Q9NX40 245 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 PSMD13Q9UNM6 376 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 PCDHGA3Q9Y5H0 932 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 MGAQ8IWI9 3026 aa17.26■□□□□ 0.35
NUP50-208ENST00000430547 PIKFYVEQ9Y2I7 2098 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 MN1Q10571 1320 aaPredicted RBP17.25■□□□□ 0.35
NUP50-208ENST00000430547 KLHL33A6NCF5 533 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 E7EVH7 732 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 ERVH48-1M5A8F1 160 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 AP2A1O95782 977 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 GAS8O95995 478 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 IFNB1P01574 187 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 STIP1P31948 543 aaKnown RBP17.25■□□□□ 0.35
NUP50-208ENST00000430547 CA5AP35218 305 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 LMAN1P49257 510 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 ATP1A2P50993 1020 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 GPR18Q14330 331 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 NFE2L1Q14494 772 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 POU6F1Q14863 301 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 KCTD11Q693B1 232 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 ARHGAP22Q7Z5H3 698 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 SNX20Q7Z614 316 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 LINC00523Q86TU6 105 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 SLC13A5Q86YT5 568 aaPredicted RBP17.25■□□□□ 0.35
NUP50-208ENST00000430547 KLHDC8BQ8IXV7 354 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 BEND7Q8N7W2 519 aaPredicted RBP17.25■□□□□ 0.35
NUP50-208ENST00000430547 HEXDCQ8WVB3 486 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 SLC39A7Q92504 469 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 SGF29Q96ES7 293 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 TEFMQ96QE5 360 aaKnown RBP17.25■□□□□ 0.35
NUP50-208ENST00000430547 COPS8Q99627 209 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 SLC40A1Q9NP59 571 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 FAM8A1Q9UBU6 413 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 ZNF148Q9UQR1 794 aa17.25■□□□□ 0.35
NUP50-208ENST00000430547 MGAT4DA6NG13 374 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 LDB2O43679 373 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 LIASO43766 372 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 RASSF9O75901 435 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 TPH1P17752 444 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 MC4RP32245 332 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 GFERP55789 205 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 XIAPP98170 497 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 MSLNQ13421 630 aaPredicted RBP17.24■□□□□ 0.35
NUP50-208ENST00000430547 CLCA4Q14CN2 919 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 PLCL1Q15111 1095 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 GPR33Q49SQ1 333 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 ZRANB3Q5FWF4 1079 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 MEI1Q5TIA1 1274 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 ANKS6Q68DC2 871 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 NXPE1Q8N323 547 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 ZSCAN1Q8NBB4 408 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 LSM14AQ8ND56 463 aaKnown RBP17.24■□□□□ 0.35
NUP50-208ENST00000430547 SNRNP27Q8WVK2 155 aaKnown RBP17.24■□□□□ 0.35
NUP50-208ENST00000430547 RTP4Q96DX8 246 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 DNAJC1Q96KC8 554 aaKnown RBP17.24■□□□□ 0.35
NUP50-208ENST00000430547 TGM7Q96PF1 710 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 FAM96AQ9H5X1 160 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 IMP3Q9NV31 184 aaKnown RBP17.24■□□□□ 0.35
NUP50-208ENST00000430547 WDR37Q9Y2I8 494 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 B3GALT1Q9Y5Z6 326 aa17.24■□□□□ 0.35
NUP50-208ENST00000430547 ERI2A8K979 691 aaKnown RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 TK2O00142 265 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 CCL22O00626 93 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 CAPN5O15484 640 aaPredicted RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 SLC35G4P0C7Q5 338 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 FDFT1P37268 417 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 CAPZBP47756 277 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 BCL7AQ4VC05 210 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 METRNLQ641Q3 311 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms