RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC12A2P55011 1212 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 RACK1P63244 317 aaKnown RBP13.1□□□□□ -0.31
SEC13-209ENST00000397117 IL9RQ01113 521 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 KIAA0895LQ68EN5 471 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CNSTQ6PJW8 725 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 TIFABQ6ZNK6 161 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 RFLNAQ6ZTI6 216 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 C4orf33Q8N1A6 199 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 ELMO2Q96JJ3 720 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 GPR22Q99680 433 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 MCMBPQ9BTE3 642 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CCDC68Q9H2F9 335 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 SERGEFQ9UGK8 458 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 SLC39A10Q9ULF5 831 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 CRYL1Q9Y2S2 319 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 PCDHGA1Q9Y5H4 931 aa13.1□□□□□ -0.31
SEC13-209ENST00000397117 ASH1LQ9NR48 2969 aaKnown RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 FAM95CA0A1B0GW59 222 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 TPP1O14773 563 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 ZIC2O95409 532 aaPredicted RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 PYGBP11216 843 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 UGT1A6P19224 532 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 UGT1A1P22309 533 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 UGT1A4P22310 534 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 TYK2P29597 1187 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 UGT1A3P35503 534 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 UGT1A5P35504 534 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 SHBQ15464 509 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 ZNF789Q5FWF6 425 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 TECPR1Q7Z6L1 1165 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 SERPINA9Q86WD7 417 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 OR14C36Q8NHC7 312 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 ALKBH8Q96BT7 664 aaKnown RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 ULK4Q96C45 1275 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 AP2M1Q96CW1 435 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 NUS1Q96E22 293 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 DTD2Q96FN9 168 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 SERAC1Q96JX3 654 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 KLF6Q99612 283 aaPredicted RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 ZSCAN5AQ9BUG6 496 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 RIOK2Q9BVS4 552 aaKnown RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 PRORYQ9H606 182 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 NFKBIL1Q9UBC1 381 aaPredicted RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 CORO1CQ9ULV4 474 aaPredicted RBP13.09□□□□□ -0.31
SEC13-209ENST00000397117 COQ6Q9Y2Z9 468 aa13.09□□□□□ -0.31
SEC13-209ENST00000397117 KALRNO60229 2985 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 A0A1W2PPC4 97 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 TK2O00142 265 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
SEC13-209ENST00000397117 GPR39O43194 453 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 RFPL1O75677 317 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 RECQL5O94762 991 aaPredicted RBP13.08□□□□□ -0.32
SEC13-209ENST00000397117 ACRV1P26436 265 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 ITPKBP27987 946 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 TAS2R38P59533 333 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 POU4F1Q01851 419 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.32
SEC13-209ENST00000397117 INAVAQ3KP66 663 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 ATP13A5Q4VNC0 1218 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 SETMARQ53H47 684 aaPredicted RBP13.08□□□□□ -0.32
SEC13-209ENST00000397117 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 RAPH1Q70E73 1250 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 GATAD2AQ86YP4 633 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 NXPE1Q8N323 547 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 TRAM1L1Q8N609 369 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 SCAMP4Q969E2 229 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 ABCG8Q9H221 673 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 SNX15Q9NRS6 342 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
SEC13-209ENST00000397117 DOCK9Q9BZ29 2069 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 PLRG1O43660 514 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 TLX3O43711 291 aaPredicted RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 SPAG7O75391 227 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 C1QL1O75973 258 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 TM7SF2O76062 418 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 PRB1P04280 392 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 WNT1P04628 370 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 MPOP05164 745 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 JUPP14923 745 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 STMN1P16949 149 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 ZNF7P17097 686 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms