RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TMEM86AQ8N2M4 240 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 NATD1Q8N6N6 113 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 FNDC5Q8NAU1 212 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 KDM1BQ8NB78 822 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 PPP1R16AQ96I34 528 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 TEFMQ96QE5 360 aaKnown RBP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 RANBP9Q96S59 729 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 GATA5Q9BWX5 397 aaPredicted RBP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 LHPPQ9H008 270 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 STOX2Q9P2F5 926 aaPredicted RBP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 MAB21L2Q9Y586 359 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 METTL21EPA6NDL7 271 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 PRAMEF1O95521 474 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 PPP2R1BP30154 601 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 RPL7AP62424 266 aaKnown RBP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 FADDQ13158 208 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 DLG2Q15700 870 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 ARL13AQ5H913 290 aaPredicted RBP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 TMPRSS11AQ6ZMR5 421 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 RASSF6Q6ZTQ3 369 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 GALNT11Q8NCW6 608 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 SLC22A17Q8WUG5 538 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 MARVELD3Q96A59 401 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 FEM1AQ9BSK4 669 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 GPR88Q9GZN0 384 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 PCDHAC1Q9H158 963 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRIM38-201ENST00000357085 MAT2BQ9NZL9 334 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 KCNN3Q9UGI6 736 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 LIMD1Q9UGP4 676 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 ANGPT4Q9Y264 503 aa6.51□□□□□ -1.37
TRIM38-201ENST00000357085 A8MU76 341 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 STX16-NPEPL1H3BU86 382 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CILPO75339 1184 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF682O95780 498 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CSH1P0DML2 217 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CSH2P0DML3 217 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MAGP20916 626 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HOXD10P28358 340 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CASP3P42574 277 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 NFKB2Q00653 900 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 BAMBIQ13145 260 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CPNE8Q86YQ8 564 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 TTC16Q8NEE8 873 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 WNT8BQ93098 351 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MUL1Q969V5 352 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CPB2Q96IY4 423 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MAPKAP1Q9BPZ7 522 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 TRIT1Q9H3H1 467 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 RNF146Q9NTX7 359 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZMAT5Q9UDW3 170 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 AGAP5A6NIR3 686 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 C2CD4BA6NLJ0 364 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DHX15O43143 795 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ALDOAP04075 364 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HIST1H2AGP0C0S8 130 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 IL1RNP18510 177 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 POLR2CP19387 275 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HIST1H2ADP20671 130 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 TBCEQ15813 527 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 BTBD16Q32M84 506 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DSG4Q86SJ6 1040 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZFP90Q8TF47 636 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CHTF18Q8WVB6 975 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HIST1H2AHQ96KK5 128 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 HIST1H2AJQ99878 128 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 H2AFJQ9BTM1 129 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PCDHGB6Q9Y5F9 930 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PTCH2Q9Y6C5 1203 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 STRCQ7RTU9 1775 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 KRBOX1C9JBD0 128 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC28A1O00337 649 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 BCAS1O75363 584 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ERN1O75460 977 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ANXA3P12429 323 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 TBC1D19Q8N5T2 526 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 OR10T2Q8NGX3 314 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 RHEBL1Q8TAI7 183 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF566Q969W8 418 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 RADILQ96JH8 1075 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 DPP3Q9NY33 737 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 RPL36Q9Y3U8 105 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF646O15015 1829 aaPredicted RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 ARHGEF33A8MVX0 844 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 POLRMTO00411 1230 aaKnown RBP6.5□□□□□ -1.37
TRIM38-201ENST00000357085 STX16O14662 325 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC7A4O43246 635 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 AMHP03971 560 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PRPS2P11908 318 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MATN1P21941 496 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 MAGEA3P43357 314 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC13A2Q13183 592 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 TAF12Q16514 161 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 PYDC2Q56P42 97 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 FKBP10Q96AY3 582 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 SLC38A2Q96QD8 506 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 CAMKK2Q96RR4 588 aa6.5□□□□□ -1.37
TRIM38-201ENST00000357085 C9IYK1 514 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms