RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ARPP19P56211 112 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 AGAP7PQ5VUJ5 663 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 KBTBD8Q8NFY9 601 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 OMA1Q96E52 524 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ITCHQ96J02 903 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CHCHD6Q9BRQ6 235 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 PAK1IP1Q9NWT1 392 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 GALPQ9UBC7 116 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CARD8Q9Y2G2 431 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 IGKV6D-21A0A0A0MT36 114 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CXCR6O00574 342 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ENPP3O14638 875 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 MSI1O43347 362 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 UROSP10746 265 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 PSMD8P48556 350 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 PPP5CP53041 499 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 OR2B6P58173 313 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ERVK-8P63133 956 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 DSC2Q02487 901 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CLEC20AQ6ZU45 233 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 AASSQ9UDR5 926 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 BMP4P12644 408 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 HOXB8P17481 243 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ITIH1P19827 911 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 HTR1EP28566 365 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 OR5K1Q8NHB7 308 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ADAMTS16Q8TE57 1224 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 REXO5Q96IC2 774 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 C12orf42Q96LP6 360 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM209Q96SK2 561 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 DSN1Q9H410 356 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 RAPGEFL1Q9UHV5 662 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SARDHQ9UL12 918 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 KCTD3Q9Y597 815 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TSC22D2O75157 780 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PAGE1O75459 146 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 GALNT3Q14435 633 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 TAC4Q86UU9 113 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 FRS2Q8WU20 508 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF486Q96H40 463 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 OR52E6Q96RD3 313 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 REEP1Q9H902 201 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 LTB4R2Q9NPC1 389 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 KLQ9UEF7 1012 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 EIF2B4Q9UI10 523 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 IFT52Q9Y366 437 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 EFCAB10A6NFE3 127 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 ITGB6P18564 788 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 AZGP1P25311 298 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 CDKN2DP55273 166 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 CCBE1Q6UXH8 406 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 MMAAQ8IVH4 418 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 CHDHQ8NE62 594 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 GPR78Q96P69 363 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 TRIM64CA6NLI5 447 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 M0QX08 132 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 SLC7A4O43246 635 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 SERPINA1P01009 418 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 IL2P60568 153 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PAQR3Q6TCH7 311 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 MIB1Q86YT6 1006 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 CILP2Q8IUL8 1156 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 TTC29Q8NA56 475 aaPredicted RBP12.88□□□□□ -0.35
TRIM35-201ENST00000305364 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 OR4L1Q8NH43 312 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 SMARCD1Q96GM5 515 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 SEMA3CQ99985 751 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 ABCG8Q9H221 673 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 PMF1-BGLAPU3KQ54 211 aa12.88□□□□□ -0.35
TRIM35-201ENST00000305364 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 KRT87PA6NCN2 255 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ZW10O43264 779 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 DYRK3O43781 588 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms