RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TAB3Q8N5C8 712 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 NAT8LQ8N9F0 302 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ZDHHC1Q8WTX9 485 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 NAT6Q93015 286 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 MAGOHBQ96A72 148 aaKnown RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC3Q9BQI4 270 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 DPEP2Q9H4A9 486 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ASB8Q9H765 288 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 LRIT1Q9P2V4 623 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ZNHIT2Q9UHR6 403 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 WDR37Q9Y2I8 494 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 PKP3Q9Y446 797 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CACNA1BQ00975 2339 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC162PA2VCL2 907 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 GOLGA6CA6NDK9 693 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 GOLGA6BA6NDN3 693 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 KMOO15229 486 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 POP7O75817 140 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM63AO94886 807 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ASMTLO95671 621 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 APRTP07741 180 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 GOLGA6DP0CG33 693 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 F3P13726 295 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 TCP1P17987 556 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 HADHAP40939 763 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ACTR1BP42025 376 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ARCN1P48444 511 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 NPY2RP49146 381 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 FNTAP49354 379 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ACTR1AP61163 376 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 DAB2P98082 770 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ITGA9Q13797 1035 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 POU6F1Q14863 301 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC38Q502W7 563 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 TSTD2Q5T7W7 516 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 ARMC3Q5W041 872 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 LRRC8BQ6P9F7 803 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC137Q6PK04 289 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 UNQ6494/PRO21346Q6UXR6 183 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 B3GNT8Q7Z7M8 397 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PHYKPLQ8IUZ5 450 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 SLITRK4Q8IW52 837 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 MCUQ8NE86 351 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 SLC37A2Q8TED4 501 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 NAT14Q8WUY8 206 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 GRAMD1AQ96CP6 724 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 SGF29Q96ES7 293 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 LRRN3Q9H3W5 708 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PLAC1Q9HBJ0 212 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 SARS2Q9NP81 518 aaKnown RBP9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PRDM8Q9NQV8 689 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 CHRAC1Q9NRG0 131 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 GOLGA6AQ9NYA3 693 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 SIRPGQ9P1W8 387 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 CLCA2Q9UQC9 943 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 KCNK6Q9Y257 313 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 TCAF1Q9Y4C2 921 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 PCDHB1Q9Y5F3 818 aa9.01□□□□□ -0.97
HMGN1-201ENST00000288344 IGHV1OR21-1A0A087WYE8 117 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 PRAMEF33A0A0G2JMD5 474 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 C17orf113A0A1B0GUU1 675 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 PHF2O75151 1096 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 AVILO75366 819 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 KRT14P02533 472 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 SLC4A1P02730 911 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 PTMAP06454 111 aaKnown RBP9□□□□□ -0.97
HMGN1-201ENST00000288344 ACP5P13686 325 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 JUPP14923 745 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 ACRV1P26436 265 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 CCKBRP32239 447 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 MC4RP32245 332 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 GNG11P61952 73 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 ETF1P62495 437 aaKnown RBP9□□□□□ -0.97
HMGN1-201ENST00000288344 TMPRSS15P98073 1019 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 SEMA3AQ14563 771 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 CLPPQ16740 277 aaPredicted RBP9□□□□□ -0.97
HMGN1-201ENST00000288344 PCID2Q5JVF3 399 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 CAPRIN2Q6IMN6 1127 aaKnown RBP9□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM220Q6QAJ8 160 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM135Q86UB9 458 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 LRRTM4Q86VH4 590 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC89Q8N998 374 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 OR2L2Q8NH16 312 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 WDR48Q8TAF3 677 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 MAPK15Q8TD08 544 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 HDAC10Q969S8 669 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 SIGLEC10Q96LC7 697 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 FCRL3Q96P31 734 aaPredicted RBP9□□□□□ -0.97
HMGN1-201ENST00000288344 FAM96AQ9H5X1 160 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 UCK1Q9HA47 277 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 KLC4Q9NSK0 619 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms