RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RGS8P57771 180 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 PRKD1Q15139 912 aaPredicted RBP7.9□□□□□ -1.14
LIMD1-201ENST00000273317 GALNT5Q7Z7M9 940 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 SNX33Q8WV41 574 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 HAS1Q92839 578 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 MLXQ9UH92 298 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 MSRAQ9UJ68 235 aa7.9□□□□□ -1.14
LIMD1-201ENST00000273317 CSDE1O75534 798 aaKnown RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 RBM34P42696 430 aaKnown RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 CRYBB1P53674 252 aaPredicted RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 RPP38P78345 283 aaKnown RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 RASGEF1BQ0VAM2 473 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 USP4Q13107 963 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 ZMYND11Q15326 602 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 FAM91A1Q658Y4 838 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 TUBA3EQ6PEY2 450 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 LCLAT1Q6UWP7 414 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 SLC43A3Q8NBI5 491 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 SLC38A4Q969I6 547 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 ZBTB45Q96K62 511 aaPredicted RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 AASSQ9UDR5 926 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHGB7Q9Y5F8 929 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 KNDC1Q76NI1 1749 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 CAPN8A6NHC0 703 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 GNALP38405 381 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 ARCN1P48444 511 aaKnown RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 ZACNQ401N2 412 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 IRF2BP2Q7Z5L9 587 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 AKAP1Q92667 903 aaKnown RBP eCLIP7.9□□□□□ -1.151e-10■□□□□ 8.5
LIMD1-201ENST00000273317 ADAM2Q99965 735 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 RAB23Q9ULC3 237 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 CYP3A5P20815 502 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 MAGEA2P43356 314 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 TAS2R40P59535 323 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 AADACL2Q6P093 401 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 ADAMTS15Q8TE58 950 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 STYXQ8WUJ0 223 aa7.9□□□□□ -1.15
LIMD1-201ENST00000273317 DNAAF2Q9NVR5 837 aaKnown RBP7.9□□□□□ -1.15
LIMD1-201ENST00000273317 PRAMEF33A0A0G2JMD5 474 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PRAMEF10O60809 474 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF432O94892 652 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ERP29P30040 261 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 GRM5P41594 1212 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 JAM2P57087 298 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CTBP1Q13363 440 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 DLG2Q15700 870 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CA9Q16790 459 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ADGRG6Q86SQ4 1221 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TRAPPC12Q8WVT3 735 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ALG3Q92685 438 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TBC1D14Q9P2M4 693 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 FKBP7Q9Y680 259 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ASCC3Q8N3C0 2202 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CD2P06729 351 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 MMP8P22894 467 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 DNAJB1P25685 340 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SCNN1GP51170 649 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ADAM8P78325 824 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF567Q8N184 647 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 DNASE1L2Q92874 299 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CPNE2Q96FN4 548 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 MECRQ9BV79 373 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 BHLHE41Q9C0J9 482 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 EGFL7Q9UHF1 273 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PAPSS1O43252 624 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 LAMP2P13473 410 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CBX3Q13185 183 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 GLYATQ6IB77 296 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 VSTM1Q6UX27 236 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 OXR1Q8N573 874 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 OR8H1Q8NGG4 311 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CLHC1Q8NHS4 586 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 FERD3LQ96RJ6 166 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 C11orf16Q9NQ32 467 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 C14orf105Q9NVL8 296 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RPL36Q9Y3U8 105 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 C22orf31O95567 290 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TFPIP10646 304 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RASGEF1AQ8N9B8 481 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 OR5K1Q8NHB7 308 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PSKH2Q96QS6 385 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SPATA9Q9BWV2 254 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SLCO1B3Q9NPD5 702 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SEC14L4Q9UDX3 406 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF99A8MXY4 864 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 KCTD19Q17RG1 926 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CPA6Q8N4T0 437 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 HTATIP2Q9BUP3 242 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RAB11FIP5Q9BXF6 653 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SLC6A15Q9H2J7 730 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 BPIFA1Q9NP55 256 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 H6PDO95479 791 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PDCD4Q53EL6 469 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 FRRS1Q6ZNA5 592 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SPPL2CQ8IUH8 684 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 APOLD1Q96LR9 279 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms