RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ESX1Q8N693 406 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 PATE1Q8WXA2 126 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
HLA-C-210ENST00000640219 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 AP1M1Q9BXS5 423 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 SUDS3Q9H7L9 328 aaPredicted RBP13.61□□□□□ -0.23
HLA-C-210ENST00000640219 FBXO8Q9NRD0 319 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 TAAR2Q9P1P5 351 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 RSPH14Q9UHP6 348 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 SHANK1Q9Y566 2161 aa13.61□□□□□ -0.23
HLA-C-210ENST00000640219 PRSS38A1L453 326 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 C3orf70A6NLC5 250 aaPredicted RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 A8MU76 341 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 EBAG9O00559 213 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 INPP4BO15327 924 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 SORBS2O94875 1100 aaKnown RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 DLGAP3O95886 979 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 KDELR1P24390 212 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 DLSTP36957 453 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 PPM1FP49593 454 aaPredicted RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 DYNLT1P63172 113 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 ZNF235Q14590 738 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 IHHQ14623 411 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 INPP5JQ15735 1006 aaPredicted RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 TMCO4Q5TGY1 634 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 TMEM135Q86UB9 458 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 GSDMCQ9BYG8 508 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 CEP41Q9BYV8 373 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 SLC29A3Q9BZD2 475 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 SUV39H2Q9H5I1 410 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 APMAPQ9HDC9 416 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 NT5MQ9NPB1 228 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 PCDH12Q9NPG4 1184 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 PDP2Q9P2J9 529 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 RRP15Q9Y3B9 282 aaKnown RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 PCDHGC4Q9Y5F7 938 aa13.6□□□□□ -0.23
HLA-C-210ENST00000640219 ARHGEF17Q96PE2 2063 aaPredicted RBP13.6□□□□□ -0.23
HLA-C-210ENST00000640219 SETD2Q9BYW2 2564 aaPredicted RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 CDC14CA4D256 554 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 KATNA1O75449 491 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 MTA2O94776 668 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 HOXC4P09017 264 aaPredicted RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 ADCY2Q08462 1091 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 ILF3Q12906 894 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 TRAF2Q12933 501 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 MAP7Q14244 749 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 SEL1L2Q5TEA6 688 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 MICALCLQ6ZW33 695 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 CROCCP2Q86T23 111 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 APLFQ8IW19 511 aaPredicted RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 PLD5Q8N7P1 536 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 FAF2Q96CS3 445 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 AHCYL2Q96HN2 611 aaKnown RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 ATP6V1G3Q96LB4 118 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 LGR4Q9BXB1 951 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 NOD2Q9HC29 1040 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 MAP10Q9P2G4 905 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 TTLL3Q9Y4R7 772 aa13.59□□□□□ -0.23
HLA-C-210ENST00000640219 ZNF106Q9H2Y7 1883 aaKnown RBP13.59□□□□□ -0.23
HLA-C-210ENST00000640219 F8P00451 2351 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 ESYT3A0FGR9 886 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 DDX3YO15523 660 aaKnown RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 SPOPO43791 374 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 DNAJB5O75953 348 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 FGGP02679 453 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 FAM153BP0C7A2 387 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 PRF1P14222 555 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 AK4P27144 223 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 GARSP41250 739 aaKnown RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 MMP13P45452 471 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 PGDP52209 483 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 ZNF135P52742 658 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 EIF3BP55884 814 aaKnown RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 GPLD1P80108 840 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 DSC2Q02487 901 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 GALNT2Q10471 571 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 RALGDSQ12967 914 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 UGP2Q16851 508 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 KRTAP21-3Q3LHN1 58 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 FAM153CQ494X1 144 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 PRR30Q53SZ7 412 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 CEP85LQ5SZL2 805 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 AGBL2Q5U5Z8 902 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 ERAP2Q6P179 960 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 SLC30A9Q6PML9 568 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 MFSD7Q6UXD7 560 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 ZC3H18Q86VM9 953 aaKnown RBP13.58□□□□□ -0.24
HLA-C-210ENST00000640219 NAGSQ8N159 534 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 PELI3Q8N2H9 469 aa13.58□□□□□ -0.24
HLA-C-210ENST00000640219 LZTR1Q8N653 840 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms