RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 FOXJ2Q9P0K8 574 aa12.52□□□□□ -0.4
CTSD-208ENST00000636843 TENM4Q6N022 2769 aa12.52□□□□□ -0.4
CTSD-208ENST00000636843 ANKRD36A6QL64 1941 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.52□□□□□ -0.41
CTSD-208ENST00000636843 TTC24A2A3L6 582 aaPredicted RBP12.52□□□□□ -0.41
CTSD-208ENST00000636843 APOL1O14791 398 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 MAFKO60675 156 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 WISP1O95388 367 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ACSL3O95573 720 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 PEX11BO96011 259 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 FUCA1P04066 466 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 RBP3P10745 1247 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
CTSD-208ENST00000636843 AMPD1P23109 780 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 LSP1P33241 339 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ETV3P41162 512 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 MAGEA4P43358 317 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 GNPDA1P46926 289 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 DPTQ07507 201 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 NFATC3Q12968 1075 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 BIRC2Q13490 618 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 TRA2AQ13595 282 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTSD-208ENST00000636843 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 KYNUQ16719 465 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ARMC12Q5T9G4 340 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 RAET1GQ6H3X3 334 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 USP45Q70EL2 814 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 HSD11B1LQ7Z5J1 315 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 PGBD5Q8N414 524 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 EXTL1Q92935 676 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
CTSD-208ENST00000636843 RDH14Q9HBH5 336 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 PCDH18Q9HCL0 1135 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 SUFUQ9UMX1 484 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
CTSD-208ENST00000636843 SPTA1P02549 2419 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 A0A087WUV0 522 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 AGRPO00253 132 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 PGLSO95336 258 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 ETS1P14921 441 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 AK4P27144 223 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 CD1CP29017 333 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SERPINB6P35237 376 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 CTBSQ01459 385 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 GUCY1A3Q02108 690 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 TRAF2Q12933 501 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 MARC1Q5VT66 337 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SLC9A4Q6AI14 798 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 ZNF574Q6ZN55 896 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 Q6ZVL8 140 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 CENPUQ71F23 418 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 PRICKLE2Q7Z3G6 844 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 TECPR1Q7Z6L1 1165 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 PRUNE1Q86TP1 453 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 VASH2Q86V25 355 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 UHMK1Q8TAS1 419 aaKnown RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 EPS8L3Q8TE67 593 aaKnown RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 COL26A1Q96A83 441 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SCARF2Q96GP6 870 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 SEMA3CQ99985 751 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 EPN3Q9H201 632 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 PPCSQ9HAB8 311 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
CTSD-208ENST00000636843 SAE1Q9UBE0 346 aaPredicted RBP12.51□□□□□ -0.41
CTSD-208ENST00000636843 IGHV5-10-1A0A0J9YXX1 117 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
CTSD-208ENST00000636843 STMND1H3BQB6 276 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 CCL4P13236 92 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 LHCGRP22888 699 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 IL4RP24394 825 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 RPL22P35268 128 aaKnown RBP12.5□□□□□ -0.41
CTSD-208ENST00000636843 MMP13P45452 471 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 GPR1P46091 355 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 LIMK2P53671 638 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 TBR1Q16650 682 aa12.5□□□□□ -0.41
CTSD-208ENST00000636843 UBAP2Q5T6F2 1119 aaKnown RBP12.5□□□□□ -0.41
CTSD-208ENST00000636843 DARS2Q6PI48 645 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms