RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HEXDCQ8WVB3 486 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ZCCHC14Q8WYQ9 949 aaKnown RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 NXPE2Q96DL1 559 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 SGF29Q96ES7 293 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 CCDC97Q96F63 343 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 ZNF514Q96K75 400 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 CAPZA3Q96KX2 299 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 COPS8Q99627 209 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 NRSN2Q9GZP1 204 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 CCDC86Q9H6F5 360 aaKnown RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 SLC2A6Q9UGQ3 507 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 RIMKLBQ9ULI2 386 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ATXN7L1Q9ULK2 861 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 NEU2Q9Y3R4 380 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 ENTPD2Q9Y5L3 495 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
UPF1-205ENST00000598209 DNMT3AQ9Y6K1 912 aaPredicted RBP13.63□□□□□ -0.23
UPF1-205ENST00000598209 FRYQ5TBA9 3013 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 KIR2DS5A0A0G2JLQ3 304 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 A0A0G2JNG1 304 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 CCDC162PA2VCL2 907 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 OR51F1A6NGY5 319 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 PDZK1P1A8MUH7 402 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 CFAP99D6REC4 459 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 KIR2DS3K7RE56 304 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 AP3B1O00203 1094 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 ZW10O43264 779 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 CAPNS1P04632 268 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 IDSP22304 550 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 FOXN2P32314 431 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 MAGEA6P43360 314 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 NPY2RP49146 381 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 CYP4F3Q08477 520 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 DMPKQ09013 629 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 KIR2DS5Q14953 304 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 AMZ1Q400G9 498 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 BCL7AQ4VC05 210 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 PCID2Q5JVF3 399 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 LRRC8BQ6P9F7 803 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 ZNF534Q76KX8 674 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 NLRP9Q7RTR0 991 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 SLC9B2Q86UD5 537 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 ZNF761Q86XN6 746 aaPredicted RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 BEND7Q8N7W2 519 aaPredicted RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 HDAC10Q969S8 669 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 GRAMD1AQ96CP6 724 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 ATXN7L3BQ96GX2 97 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 ZNF778Q96MU6 729 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 SLC38A3Q99624 504 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 STN1Q9H668 368 aaKnown RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 SARS2Q9NP81 518 aaKnown RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 BFARQ9NZS9 450 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 SCHIP1Q9P0W5 487 aaPredicted RBP13.62□□□□□ -0.23
UPF1-205ENST00000598209 CPNE7Q9UBL6 633 aa13.62□□□□□ -0.23
UPF1-205ENST00000598209 IGLV3-16A0A075B6K0 115 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 FANCGO15287 622 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 SGTAO43765 313 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 GOT2P00505 430 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 ATP1B2P14415 290 aaPredicted RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 BRAFP15056 766 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 MGAT1P26572 445 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 RPL10P27635 214 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 DRG2P55039 364 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 UBE2IP63279 158 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 CRADDP78560 199 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 SARNPP82979 210 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 ACVR1Q04771 509 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 NFE2L1Q14494 772 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 RTP5Q14D33 572 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 DBN1Q16643 649 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 ST3GAL2Q16842 350 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 MAP9Q49MG5 647 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 AGAP9Q5VTM2 703 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 AFTPHQ6ULP2 937 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 ABRAXAS1Q6UWZ7 409 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 WASH2PQ6VEQ5 465 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 FAM83HQ6ZRV2 1179 aaPredicted RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 B3GNT8Q7Z7M8 397 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 CREG2Q8IUH2 290 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 PIANPQ8IYJ0 282 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 AVL9Q8NBF6 648 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 CPT1BQ92523 772 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 PEX13Q92968 403 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.61□□□□□ -0.23
UPF1-205ENST00000598209 SH3KBP1Q96B97 665 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 FOXP3Q9BZS1 431 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 IL22Q9GZX6 179 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 DDX47Q9H0S4 455 aaKnown RBP13.61□□□□□ -0.23
UPF1-205ENST00000598209 WASH6PQ9NQA3 447 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 CHRAC1Q9NRG0 131 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 KCNK4Q9NYG8 393 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 AK5Q9Y6K8 562 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 IGF2RP11717 2491 aa13.61□□□□□ -0.23
UPF1-205ENST00000598209 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
UPF1-205ENST00000598209 MGAT4DA6NG13 374 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms