RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KHDC1Q4VXA5 237 aaKnown RBP13.01□□□□□ -0.33
H3F3B-213ENST00000593254 TMEM71Q6P5X7 295 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 LRRC57Q8N9N7 239 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 ACRBPQ8NEB7 543 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 IPMKQ8NFU5 416 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 OR10G6Q8NH81 332 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 DTX3LQ8TDB6 740 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 SLC38A3Q99624 504 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 OSBPL8Q9BZF1 889 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 STN1Q9H668 368 aaKnown RBP13.01□□□□□ -0.33
H3F3B-213ENST00000593254 BPIFA1Q9NP55 256 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 KLC4Q9NSK0 619 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 HACD3Q9P035 362 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 IL17CQ9P0M4 197 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 TMEM9Q9P0T7 183 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 PDP2Q9P2J9 529 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 RSPH14Q9UHP6 348 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 ANAPC2Q9UJX6 822 aa13.01□□□□□ -0.33
H3F3B-213ENST00000593254 PRR19A6NJB7 356 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 OR5K4A6NMS3 321 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 H7C0C1 242 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 KMOO15229 486 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 DUX1O43812 170 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 VEGFDO43915 354 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 SNX2O60749 519 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 MTX2O75431 263 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ZNF7P17097 686 aaPredicted RBP13□□□□□ -0.33
H3F3B-213ENST00000593254 ATP5OP48047 213 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 EPHA4P54764 986 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
H3F3B-213ENST00000593254 RWDD2BP57060 319 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 UBE2IP63279 158 aaKnown RBP13□□□□□ -0.33
H3F3B-213ENST00000593254 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
H3F3B-213ENST00000593254 NFATC2Q13469 925 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ATP13A5Q4VNC0 1218 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 CCDC181Q5TID7 509 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ZDHHC20Q5W0Z9 365 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 CRTC3Q6UUV7 619 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 GLT6D1Q7Z4J2 308 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 SLC9B2Q86UD5 537 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 LRRTM4Q86VH4 590 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 TMEM139Q8IV31 216 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ZNF547Q8IVP9 402 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 AVL9Q8NBF6 648 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 AGBL5Q8NDL9 886 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ACTL9Q8TC94 416 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ALG3Q92685 438 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 SH3KBP1Q96B97 665 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 AHCYL2Q96HN2 611 aaKnown RBP13□□□□□ -0.33
H3F3B-213ENST00000593254 GORASP1Q9BQQ3 440 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 TIMM29Q9BSF4 260 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 GBA3Q9H227 469 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 OCEL1Q9H607 264 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 C10orf88Q9H8K7 445 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 IL26Q9NPH9 171 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 PRDM8Q9NQV8 689 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 CPNE7Q9UBL6 633 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 SLC23A2Q9UGH3 650 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
H3F3B-213ENST00000593254 GRID2IPA4D2P6 1211 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 ANXA9O76027 345 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 CDK14O94921 469 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 FGF3P11487 239 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 MPSTP25325 297 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 SPAM1P38567 509 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 ARSDP51689 593 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 GEMP55040 296 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 INSCQ1MX18 579 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 PLA2G4EQ3MJ16 856 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 ITPRIPL1Q6GPH6 555 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 WDR74Q6RFH5 385 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 C11orf96Q7Z7L8 435 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 BLOC1S5Q8TDH9 187 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 BAG1Q99933 345 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 FSD1LQ9BXM9 530 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 OSGEPL1Q9H4B0 414 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.99□□□□□ -0.337e-10■■□□□ 13.3
H3F3B-213ENST00000593254 SCHIP1Q9P0W5 487 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-213ENST00000593254 PCDHGA3Q9Y5H0 932 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 PIKFYVEQ9Y2I7 2098 aa12.99□□□□□ -0.33
H3F3B-213ENST00000593254 MACROD2A1Z1Q3 448 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 BLACEA4D250 179 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 STMND1H3BQB6 276 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 GAPDHSO14556 408 aaPredicted RBP12.98□□□□□ -0.33
H3F3B-213ENST00000593254 RBP3P10745 1247 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 XRCC1P18887 633 aaPredicted RBP12.98□□□□□ -0.33
H3F3B-213ENST00000593254 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
H3F3B-213ENST00000593254 ADRA1AP35348 466 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 EIF3EP60228 445 aaKnown RBP12.98□□□□□ -0.33
H3F3B-213ENST00000593254 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
H3F3B-213ENST00000593254 GSE1Q14687 1217 aa12.98□□□□□ -0.33
H3F3B-213ENST00000593254 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms