RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 Q6ZVU0 165 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ADGRG6Q86SQ4 1221 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 MYO1HQ8N1T3 1032 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 LKAAEAR1Q8TD35 194 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 PLEKHG4BQ96PX9 1271 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF184Q99676 751 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 HTATIP2Q9BUP3 242 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CPEB1Q9BZB8 566 aaKnown RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 POP4O95707 220 aaKnown RBP13.87□□□□□ -0.19
VPS33B-208ENST00000574755 S100BP04271 92 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-208ENST00000574755 UROSP10746 265 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 LBPP18428 481 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 TCN1P20061 433 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-208ENST00000574755 ARL1P40616 181 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-208ENST00000574755 PSME3P61289 254 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 NTHL1P78549 312 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 LRP8Q14114 963 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 ELMSAN1Q6PJG2 1045 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 PHYKPLQ8IUZ5 450 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 NXPE1Q8N323 547 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 DCBLD1Q8N8Z6 715 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF225Q9UK10 706 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 PCDHGA7Q9Y5G6 932 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 MRASO14807 208 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 NRP2O60462 931 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 VPS4BO75351 444 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 EPCAMP16422 314 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 GPX3P22352 226 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 LHCGRP22888 699 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 DGKAP23743 735 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 LRRC73Q5JTD7 316 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 LY6G5CQ5SRR4 150 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 GPRIN3Q6ZVF9 776 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 KBTBD2Q8IY47 623 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 MIER2Q8N344 545 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 NUSAP1Q9BXS6 441 aaKnown RBP13.87□□□□□ -0.19
VPS33B-208ENST00000574755 TBC1D14Q9P2M4 693 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 BCAP29Q9UHQ4 241 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 NOTCH4Q99466 2003 aa13.87□□□□□ -0.19
VPS33B-208ENST00000574755 RAD51BO15315 384 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 FFAR2O15552 330 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 GUCA1CO95843 209 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 IRS1P35568 1242 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PTSQ03393 145 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF77Q15935 545 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PSRC1Q6PGN9 363 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 IZUMO2Q6UXV1 221 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 RNF111Q6ZNA4 994 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 RTL10Q7L3V2 364 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 EFL1Q7Z2Z2 1120 aaKnown RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 FUNDC1Q8IVP5 155 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZBTB2Q8N680 514 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 NAT16Q8N8M0 369 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF557Q8N988 423 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 OR52B6Q8NGF0 335 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF641Q96N77 438 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 CDK15Q96Q40 435 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 FAM126AQ9BYI3 521 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 TNPO3Q9Y5L0 923 aaKnown RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 WNT6Q9Y6F9 365 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PRRC2BQ5JSZ5 2229 aaKnown RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 E7ENX8 843 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 NR5A2O00482 541 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 XYLBO75191 536 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 OR4F21O95013 312 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 NSG1P42857 185 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PTPN5P54829 565 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 MS4A2Q01362 244 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 LRRC36Q1X8D7 754 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 LAYNQ6UX15 382 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 SPRED2Q7Z698 418 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 GRASPQ7Z6J2 395 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ADIPOR2Q86V24 386 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 CDYL2Q8N8U2 506 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 BHLHE22Q8NFJ8 381 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 PBXIP1Q96AQ6 731 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZSWIM3Q96MP5 696 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF382Q96SR6 550 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 ABCG8Q9H221 673 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 NOL11Q9H8H0 719 aaKnown RBP13.86□□□□□ -0.19
VPS33B-208ENST00000574755 BRD9Q9H8M2 597 aa13.86□□□□□ -0.19
VPS33B-208ENST00000574755 SPAG4Q9NPE6 437 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms