RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CRTC3Q6UUV7 619 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 BBS12Q6ZW61 710 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ZC3H18Q86VM9 953 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 AMZ2Q86W34 360 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 BPHLQ86WA6 291 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF567Q8N184 647 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 TTC30BQ8N4P2 665 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ESX1Q8N693 406 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 TC2NQ8N9U0 490 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 GDAP1Q8TB36 358 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ZFPM2Q8WW38 1151 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 JPH3Q8WXH2 748 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 PMEPA1Q969W9 287 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 CXorf40BQ96DE9 158 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 PPP1R2P1Q96PQ5 205 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 QKIQ96PU8 341 aaKnown RBP eCLIP11.98□□□□□ -0.494e-7■■■■■ 27
GTF3C1-204ENST00000564664 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 TRIM5Q9C035 493 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC25A18Q9H1K4 315 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 GPN2Q9H9Y4 310 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 BPIFA1Q9NP55 256 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 ARFGAP3Q9NP61 516 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 UBP1Q9NZI7 540 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 SCHIP1Q9P0W5 487 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 HYOU1Q9Y4L1 999 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 SPO11Q9Y5K1 396 aa11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 TLN1Q9Y490 2541 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-204ENST00000564664 GLYATL1P3A0A0U1RQE8 302 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 C2orf81A6NN90 581 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC28A2O43868 658 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 STK17BO94768 372 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 APOC2P02655 101 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC4A1P02730 911 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 FAM87AP0C7U9 286 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 PYGMP11217 842 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 BRAFP15056 766 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 CETN2P41208 172 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 CCR10P46092 362 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 GEMP55040 296 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 PDE1BQ01064 536 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 KCNC4Q03721 635 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 ITPRIPL1Q6GPH6 555 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 ATG14Q6ZNE5 492 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 B4GALNT4Q76KP1 1039 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 PRSS42Q7Z5A4 293 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 C11orf96Q7Z7L8 435 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 TRAPPC5Q8IUR0 188 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 CCDC50Q8IVM0 306 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 RNF214Q8ND24 703 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 FCRL4Q96PJ5 515 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 FSD1LQ9BXM9 530 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF768Q9H5H4 540 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 SMOXQ9NWM0 555 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 OGFRQ9NZT2 677 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 SEMA5BQ9P283 1151 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 TMPRSS11EQ9UL52 423 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 DNAJC16Q9Y2G8 782 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 AAR2Q9Y312 384 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 PCDHA3Q9Y5H8 950 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC30A1Q9Y6M5 507 aa11.97□□□□□ -0.49
GTF3C1-204ENST00000564664 C5orf60A6NFR6 353 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 BTNL10A8MVZ5 291 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 STX7O15400 261 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 MTX2O75431 263 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 POP7O75817 140 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 WISP1O95388 367 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 DLGAP3O95886 979 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 RECKO95980 971 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 MT-ND3P03897 115 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 TYRP1P17643 537 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 RPL10P27635 214 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 PTPN7P35236 360 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 CAPZBP47756 277 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 CYP4F2P78329 520 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 ADCY2Q08462 1091 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 PRPSAP1Q14558 356 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 TAF1AQ15573 450 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 CHRNA6Q15825 494 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 KHDC1Q4VXA5 237 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 RANBP10Q6VN20 620 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 GLT6D1Q7Z4J2 308 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 DAAM2Q86T65 1068 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 TMTC1Q8IUR5 882 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 SLC25A41Q8N5S1 370 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 DDHD1Q8NEL9 900 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 ZNF398Q8TD17 642 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 BLOC1S5Q8TDH9 187 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 HEXDCQ8WVB3 486 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 KLHL6Q8WZ60 621 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 LRRC45Q96CN5 670 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 HAUS1Q96CS2 278 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 OXNAD1Q96HP4 312 aaPredicted RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 PANX2Q96RD6 677 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 SIDT1Q9NXL6 827 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 KLHL3Q9UH77 587 aa11.96□□□□□ -0.49
GTF3C1-204ENST00000564664 RSPH14Q9UHP6 348 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms