RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 UBE2R2Q712K3 238 aaPredicted RBP10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 UBR7Q8N806 425 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 BHLHE22Q8NFJ8 381 aaPredicted RBP10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC44A1Q8WWI5 657 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 IL12RB2Q99665 862 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 PBX4Q9BYU1 374 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 ASPSCR1Q9BZE9 553 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 OSBPL6Q9BZF3 934 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 OR2AG1Q9H205 316 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 S100A14Q9HCY8 104 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 SH3BP4Q9P0V3 963 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 KCNE2Q9Y6J6 123 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 UPK3BL1B0FP48 263 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 UPK3BL2E5RIL1 263 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 SEC22BO75396 215 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 LEFTY1O75610 366 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 ZNF23P17027 643 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 RFX3P48380 749 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 PIK3CGP48736 1102 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 TNK2Q07912 1038 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 SNAP47Q5SQN1 464 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 MPP5Q8N3R9 675 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 ACMSDQ8TDX5 336 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 GIPC3Q8TF64 312 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 SELENOMQ8WWX9 145 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 HLA-CQ95604 372 aa10.56□□□□□ -0.72
CARMIL3-202ENST00000559694 A0A087WXM4 84 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 EVPLLA8MZ36 301 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 H3BNC9 293 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 PSMD12O00232 456 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 FFAR3O14843 346 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 DCLK1O15075 740 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 GPR42O15529 346 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 PAK4O96013 591 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 ARSAP15289 507 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 RSPO2Q6UXX9 243 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 KIAA0408Q6ZU52 694 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 Q6ZVL8 140 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 NAT8LQ8N9F0 302 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 TSGA13Q96PP4 275 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC22A12Q96S37 553 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 MRPS26Q9BYN8 205 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC2A11Q9BYW1 496 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 RUBCNLQ9H714 662 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 B4GALT6Q9UBX8 382 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 DAPK2Q9UIK4 370 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 CD72P21854 359 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 EIF4HQ15056 248 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 CPSF6Q16630 551 aaKnown RBP eCLIP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 PPM1JQ5JR12 505 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 KLHDC10Q6PID8 442 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 ZNF554Q86TJ5 538 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 ZBTB46Q86UZ6 589 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 MICU2Q8IYU8 434 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 TCF12Q99081 682 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 MRPL57Q9BQC6 102 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 TRIM45Q9H8W5 580 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 MIEF1Q9NQG6 463 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 KCTD3Q9Y597 815 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 ZNF33AQ06730 810 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 KRT72Q14CN4 511 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 CHRNA6Q15825 494 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 AGKQ53H12 422 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 IL27RAQ6UWB1 636 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 GAREM2Q75VX8 874 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 SATL1Q86VE3 508 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC44A2Q8IWA5 706 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 NPWQ8N729 165 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 FNDC5Q8NAU1 212 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 C10orf82Q8WW14 230 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 TUBGCP5Q96RT8 1024 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 INVSQ9Y283 1065 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 LOXHD1Q8IVV2 1947 aa10.55□□□□□ -0.72
CARMIL3-202ENST00000559694 IQCF5A8MTL0 148 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 TTC34A8MYJ7 566 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 CLOCKO15516 846 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 LATS1O95835 1130 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 NELFEP18615 380 aaKnown RBP10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 NSG1P42857 185 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 CLK1P49759 484 aaKnown RBP10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 TRAF2Q12933 501 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 PON2Q15165 354 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 PKDCCQ504Y2 493 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 ENPP7Q6UWV6 458 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 TRMT2BQ96GJ1 504 aaKnown RBP10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 NDEL1Q9GZM8 345 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 MTG2Q9H4K7 406 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 WDR26Q9H7D7 661 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 KLHL3Q9UH77 587 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 MAN2B1O00754 1011 aa10.54□□□□□ -0.72
CARMIL3-202ENST00000559694 MAPK1P28482 360 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms