RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 MAGEA6P43360 314 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 GPR3P46089 330 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 PDX1P52945 283 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 CACNG1Q06432 222 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 KCNJ11Q14654 390 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF534Q76KX8 674 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 NLRP9Q7RTR0 991 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 TAS2R42Q7RTR8 314 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 SERPINA9Q86WD7 417 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 CREG2Q8IUH2 290 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 PIANPQ8IYJ0 282 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 BEND7Q8N7W2 519 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 KDF1Q8NAX2 398 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 MDM1Q8TC05 714 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 NRSN2Q9GZP1 204 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 CHRAC1Q9NRG0 131 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 ZDHHC3Q9NYG2 299 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 SCHIP1Q9P0W5 487 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 ATXN7L1Q9ULK2 861 aaPredicted RBP18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 ENTPD2Q9Y5L3 495 aa18.42■□□□□ 0.54
PRPF40B-206ENST00000547764 KIR2DS5A0A0G2JLQ3 304 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 A0A0G2JNG1 304 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 CCDC162PA2VCL2 907 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 OR51F1A6NGY5 319 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 PDZK1P1A8MUH7 402 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 D6RAR5 112 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 KIR2DS3K7RE56 304 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 AP3B1O00203 1094 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 SGTAO43765 313 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 RALBP11234 206 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 IDSP22304 550 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ACRV1P26436 265 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 RPL10P27635 214 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 NPY2RP49146 381 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 DRG2P55039 364 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 CRADDP78560 199 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 HHEXQ03014 270 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ACVR1Q04771 509 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 CYP4F3Q08477 520 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 DMPKQ09013 629 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 KIR2DS5Q14953 304 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 AMZ1Q400G9 498 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 BCL7AQ4VC05 210 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 PCID2Q5JVF3 399 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ANKRD22Q5VYY1 191 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 LRRC8BQ6P9F7 803 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 SLC9B2Q86UD5 537 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF761Q86XN6 746 aaPredicted RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 PPHLN1Q8NEY8 458 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 GRK7Q8WTQ7 553 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 HEXDCQ8WVB3 486 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ZCCHC14Q8WYQ9 949 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 CPT1BQ92523 772 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 HDAC10Q969S8 669 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 ATXN7L3BQ96GX2 97 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 IL22Q9GZX6 179 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 CCDC86Q9H6F5 360 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 SARS2Q9NP81 518 aaKnown RBP18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
PRPF40B-206ENST00000547764 WDFY3Q8IZQ1 3526 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 IGLV3-16A0A075B6K0 115 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 CFAP99D6REC4 459 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 ZW10O43264 779 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 ATP1B2P14415 290 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 BRAFP15056 766 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 PBLDP30039 288 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 FOXN2P32314 431 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 NFE2L1Q14494 772 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 RTP5Q14D33 572 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 DBN1Q16643 649 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 AGAP9Q5VTM2 703 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 ABRAXAS1Q6UWZ7 409 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 WASH2PQ6VEQ5 465 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 FAM83HQ6ZRV2 1179 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 B3GNT8Q7Z7M8 397 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 PEX13Q92968 403 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 NXPE2Q96DL1 559 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 SLC38A3Q99624 504 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 WASH6PQ9NQA3 447 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 KCNK4Q9NYG8 393 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 ZNF624Q9P2J8 865 aaPredicted RBP18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 CPNE7Q9UBL6 633 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 WDR37Q9Y2I8 494 aa18.4■□□□□ 0.54
PRPF40B-206ENST00000547764 FREM2Q5SZK8 3169 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 IGHV1OR21-1A0A087WYE8 117 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 MGAT4DA6NG13 374 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 GOT2P00505 430 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 XRCC1P18887 633 aaPredicted RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 MGAT1P26572 445 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 CD1CP29017 333 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 SLC19A1P41440 591 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 UBE2IP63279 158 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 SARNPP82979 210 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 ST3GAL2Q16842 350 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 NKAIN2Q5VXU1 208 aa18.39■□□□□ 0.53
PRPF40B-206ENST00000547764 AFTPHQ6ULP2 937 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms