RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FOXO1Q12778 655 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 SLC10A2Q12908 348 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 RFTN1Q14699 578 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 PDK1Q15118 436 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TAZQ16635 292 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 CARD16Q5EG05 197 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 C9orf64Q5T6V5 341 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF776Q68DI1 518 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 ANO7Q6IWH7 933 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TIGD7Q6NT04 549 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 C22orf39Q6P5X5 142 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TSSK4Q6SA08 328 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 KIAA1324Q6UXG2 1013 aaKnown RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 B4GALNT4Q76KP1 1039 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 DSG4Q86SJ6 1040 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 CREG2Q8IUH2 290 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TP53INP2Q8IXH6 220 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 SLC35F6Q8N357 371 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 BBS5Q8N3I7 341 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 PCDH20Q8N6Y1 951 aaKnown RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 OR2T3Q8NH03 318 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 STT3BQ8TCJ2 826 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 CREB3L4Q8TEY5 395 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 OR8D1Q8WZ84 308 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 PRCCQ92733 491 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 ISG20Q96AZ6 181 aaKnown RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF599Q96NL3 588 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TSGA13Q96PP4 275 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 CINPQ9BW66 212 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 MKRN2Q9H000 416 aaKnown RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 MTG2Q9H4K7 406 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 PDFQ9HBH1 243 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 PREBQ9HCU5 417 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 DTLQ9NZJ0 730 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 TMEFF2Q9UIK5 374 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 C19orf53Q9UNZ5 99 aaPredicted RBP5.13□□□□□ -1.59
CLIP1-217ENST00000543205 ACTL7AQ9Y615 435 aa5.13□□□□□ -1.59
CLIP1-217ENST00000543205 NCOR2Q9Y618 2525 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 APOC4-APOC2K7ER74 178 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MATN3O15232 486 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ALOX15BO15296 676 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TMCC1O94876 653 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GOSR1O95249 250 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 CD160O95971 181 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 IGSF6O95976 241 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GSRP00390 522 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TGFB1P01137 390 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 APOC2P02655 101 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 SP9P0CG40 484 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ALOX12P18054 663 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GABRG2P18507 467 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ITIH2P19823 946 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 CCNCP24863 283 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 PTX3P26022 381 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 HOXA6P31267 233 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 PXNP49023 591 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 FNTBP49356 437 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GNG11P61952 73 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 RAB1AP62820 205 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 RNF4P78317 190 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 RAD51Q06609 339 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 BYSLQ13895 437 aaKnown RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ELAVL3Q14576 367 aaKnown RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF235Q14590 738 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 CYTH1Q15438 398 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF528Q3MIS6 628 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 USP39Q53GS9 565 aaKnown RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 HS1BP3Q53T59 392 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MARC1Q5VT66 337 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 DCAF12L1Q5VU92 463 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 AADACL2Q6P093 401 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 SLC22A25Q6T423 547 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 BBS12Q6ZW61 710 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 FAM214BQ7L5A3 538 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 LONP2Q86WA8 852 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TMPRSS6Q8IU80 811 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MMAAQ8IVH4 418 aaKnown RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 CCDC13Q8IYE1 715 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MAML2Q8IZL2 1156 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 STK40Q8N2I9 435 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 PRSS33Q8NF86 280 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MDGA1Q8NFP4 955 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GOT1L1Q8NHS2 421 aaPredicted RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GANCQ8TET4 914 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 RNF141Q8WVD5 230 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TFB1MQ8WVM0 346 aaKnown RBP5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MUL1Q969V5 352 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 HAUS1Q96CS2 278 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 SIPA1Q96FS4 1042 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 COX4I2Q96KJ9 171 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 MRGPRX1Q96LB2 322 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 GDAP1L1Q96MZ0 367 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 C7orf26Q96N11 449 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 FERMT1Q9BQL6 677 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 HEPHQ9BQS7 1158 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 ASPNQ9BXN1 380 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TLR10Q9BXR5 811 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 TM6SF2Q9BZW4 377 aa5.12□□□□□ -1.59
CLIP1-217ENST00000543205 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms