RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GPR3P46089 330 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 VPS41P49754 854 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 UBE2IP63279 158 aaKnown RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 HHEXQ03014 270 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 ACVR1Q04771 509 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 DMPKQ09013 629 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 KIR2DS5Q14953 304 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 GPR33Q49SQ1 333 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 FNBP1LQ5T0N5 605 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 TSTD2Q5T7W7 516 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 PAPD7Q5XG87 772 aaKnown RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 CCDC137Q6PK04 289 aaKnown RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 ABRAXAS1Q6UWZ7 409 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 FAM83HQ6ZRV2 1179 aaPredicted RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 PIANPQ8IYJ0 282 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 GRAMD1AQ96CP6 724 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 FOXP3Q9BZS1 431 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 SARS2Q9NP81 518 aaKnown RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 ZNF624Q9P2J8 865 aaPredicted RBP16.61■□□□□ 0.25
CD9-209ENST00000540891 RIMKLBQ9ULI2 386 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 WDR37Q9Y2I8 494 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 TCAF1Q9Y4C2 921 aa16.61■□□□□ 0.25
CD9-209ENST00000540891 IGHV1OR21-1A0A087WYE8 117 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 CCDC162PA2VCL2 907 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 OR5K4A6NMS3 321 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 MPOP05164 745 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SLC2A4P14672 509 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 TCP1P17987 556 aaKnown RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 TPSB2P20231 275 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 ACRV1P26436 265 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 RPL10P27635 214 aaKnown RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 FOXN2P32314 431 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SLC19A1P41440 591 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 MAGEA6P43360 314 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 DRG2P55039 364 aaKnown RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 CFHR1Q03591 330 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 ZFP36L1Q07352 338 aaKnown RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 GPS1Q13098 491 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 BIRC2Q13490 618 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 NFE2L1Q14494 772 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 TPSAB1Q15661 275 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SEPT7Q16181 437 aaKnown RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 SKIDA1Q1XH10 827 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 AMZ1Q400G9 498 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 ZRANB3Q5FWF4 1079 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 AGAP9Q5VTM2 703 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 NKAIN2Q5VXU1 208 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 WASH2PQ6VEQ5 465 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SLC9B2Q86UD5 537 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 AMZ2Q86W34 360 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SERPINA9Q86WD7 417 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 PRR11Q96HE9 360 aaPredicted RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 COPS8Q99627 209 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 NUDT22Q9BRQ3 303 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 RDH14Q9HBH5 336 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 WASH6PQ9NQA3 447 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 ZDHHC3Q9NYG2 299 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 CPNE7Q9UBL6 633 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 DNMT3AQ9Y6K1 912 aaPredicted RBP16.6■□□□□ 0.25
CD9-209ENST00000540891 AK5Q9Y6K8 562 aa16.6■□□□□ 0.25
CD9-209ENST00000540891 PDZK1P1A8MUH7 402 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 BRINP1O60477 761 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 KCNJ13O60928 360 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 GAS8O95995 478 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 IDSP22304 550 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 PBLDP30039 288 aaPredicted RBP16.59■□□□□ 0.25
CD9-209ENST00000540891 CCKBRP32239 447 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CSF2RBP32927 897 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 FNTAP49354 379 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 TERF1P54274 439 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 INHBCP55103 352 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
CD9-209ENST00000540891 GABREP78334 506 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CRADDP78560 199 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CACNG1Q06432 222 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 SQSTM1Q13501 440 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CLCA4Q14CN2 919 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 DBN1Q16643 649 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 C3orf38Q5JPI3 329 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 ANKRD22Q5VYY1 191 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 ZNF574Q6ZN55 896 aaPredicted RBP16.59■□□□□ 0.25
CD9-209ENST00000540891 USP53Q70EK8 1073 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CPT1BQ92523 772 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 HDAC10Q969S8 669 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 ZNF514Q96K75 400 aaPredicted RBP16.59■□□□□ 0.25
CD9-209ENST00000540891 LINC00615Q96LM1 132 aaPredicted RBP16.59■□□□□ 0.25
CD9-209ENST00000540891 SEMA6CQ9H3T2 930 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 CHRAC1Q9NRG0 131 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 KCNK4Q9NYG8 393 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 SATB2Q9UPW6 733 aa16.59■□□□□ 0.25
CD9-209ENST00000540891 USP24Q9UPU5 2620 aa16.58■□□□□ 0.25
CD9-209ENST00000540891 PRAMEF33A0A0G2JMD5 474 aa16.58■□□□□ 0.24
CD9-209ENST00000540891 MGAT4DA6NG13 374 aa16.58■□□□□ 0.24
CD9-209ENST00000540891 OR52A4PA6NMU1 304 aa16.58■□□□□ 0.24
CD9-209ENST00000540891 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms