RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZDHHC3Q9NYG2 299 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 DKK4Q9UBT3 224 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 SLC2A6Q9UGQ3 507 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 PCDHB1Q9Y5F3 818 aa20.12■□□□□ 0.81
CCS-208ENST00000533244 CCDC78A2IDD5 438 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 CTAGE9A4FU28 777 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 OR2AG2A6NM03 316 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 OR5K4A6NMS3 321 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 RHPN2P1A8MT19 583 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 B4GAT1O43505 415 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 SNX2O60749 519 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 POP7O75817 140 aaKnown RBP20.11■□□□□ 0.81
CCS-208ENST00000533244 PRSS56P0CW18 603 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 ACRV1P26436 265 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 FOXN2P32314 431 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 NPY2RP49146 381 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 RTP5Q14D33 572 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 AGAP9Q5VTM2 703 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 ABRAXAS1Q6UWZ7 409 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 CPT1BQ92523 772 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 SLCO2A1Q92959 643 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 LINC00615Q96LM1 132 aaPredicted RBP20.11■□□□□ 0.81
CCS-208ENST00000533244 GFM1Q96RP9 751 aaKnown RBP20.11■□□□□ 0.81
CCS-208ENST00000533244 IL22Q9GZX6 179 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 OSGEPL1Q9H4B0 414 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 DNAJC16Q9Y2G8 782 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 ENTPD2Q9Y5L3 495 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 USP24Q9UPU5 2620 aa20.11■□□□□ 0.81
CCS-208ENST00000533244 CCDC162PA2VCL2 907 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 BRAFP15056 766 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 VCLP18206 1134 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 SESN2P58004 480 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 UBE2IP63279 158 aaKnown RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 ZRANB3Q5FWF4 1079 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 PCID2Q5JVF3 399 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 XKR5Q6UX68 686 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 AMZ2Q86W34 360 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 SERPINA9Q86WD7 417 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 C17orf53Q8N3J3 647 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 Q8N9G6 341 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 PPHLN1Q8NEY8 458 aaKnown RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 SGF29Q96ES7 293 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 SGSM3Q96HU1 749 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 SCHIP1Q9P0W5 487 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 PCYOX1Q9UHG3 505 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 UNC13CQ8NB66 2214 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 TRBV23OR9-2A0A075B6M9 112 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 KLHL33A6NCF5 533 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 OR51F1A6NGY5 319 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 TMEM63AO94886 807 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 RALBP11234 206 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 IDSP22304 550 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 PRLHRP49683 370 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 OR1D5P58170 312 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 HHEXQ03014 270 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 SQSTM1Q13501 440 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 DBN1Q16643 649 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 CLPPQ16740 277 aaPredicted RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 FNBP1LQ5T0N5 605 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 ANKRD22Q5VYY1 191 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 DET1Q7L5Y6 550 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 HDAC10Q969S8 669 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 NXPE2Q96DL1 559 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 DCUN1D1Q96GG9 259 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 CAPZA3Q96KX2 299 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 DDX47Q9H0S4 455 aaKnown RBP20.1■□□□□ 0.81
CCS-208ENST00000533244 TREX1Q9NSU2 369 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 BFARQ9NZS9 450 aa20.1■□□□□ 0.81
CCS-208ENST00000533244 CFAP99D6REC4 459 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 ATP1B2P14415 290 aaPredicted RBP20.09■□□□□ 0.81
CCS-208ENST00000533244 CRADDP78560 199 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 ITIH4Q14624 930 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 ARMC3Q5W041 872 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 AFTPHQ6ULP2 937 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 FAM83HQ6ZRV2 1179 aaPredicted RBP20.09■□□□□ 0.81
CCS-208ENST00000533244 SLC9B2Q86UD5 537 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 BEND7Q8N7W2 519 aaPredicted RBP20.09■□□□□ 0.81
CCS-208ENST00000533244 AVL9Q8NBF6 648 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 MCUQ8NE86 351 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 OR2L2Q8NH16 312 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 NAT14Q8WUY8 206 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 SYNDIG1Q9H7V2 258 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 MRM3Q9HC36 420 aaKnown RBP20.09■□□□□ 0.81
CCS-208ENST00000533244 CHRAC1Q9NRG0 131 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 CPNE7Q9UBL6 633 aa20.09■□□□□ 0.81
CCS-208ENST00000533244 IGHV1OR21-1A0A087WYE8 117 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 A0A1W2PNU3 283 aaPredicted RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 MGAT4DA6NG13 374 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 PDZK1P1A8MUH7 402 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 ZW10O43264 779 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 GOT2P00505 430 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 MLNP12872 115 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 MGAT1P26572 445 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 CD1CP29017 333 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 CCKBRP32239 447 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 PTGIRP43119 386 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 SARNPP82979 210 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 BIRC2Q13490 618 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 NFE2L1Q14494 772 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms