RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KIR2DS3K7RE56 304 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 KMOO15229 486 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 SGTAO43765 313 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 DUX1O43812 170 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 VEGFDO43915 354 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 PPP1CAP62136 330 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 XIAPP98170 497 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 KLF1Q13351 362 aaPredicted RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 PEX6Q13608 980 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 KIR2DS5Q14953 304 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 CLPPQ16740 277 aaPredicted RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 ANKS6Q68DC2 871 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 DARS2Q6PI48 645 aaKnown RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 SLC9B2Q86UD5 537 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 CDKL3Q8IVW4 592 aaPredicted RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 TAB3Q8N5C8 712 aaPredicted RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 DDHD1Q8NEL9 900 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 OR4K2Q8NGD2 314 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 OR13C4Q8NGS5 318 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 OR10G6Q8NH81 332 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 GDAP1Q8TB36 358 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 SPATA13Q96N96 652 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 TIMM29Q9BSF4 260 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 FSD1LQ9BXM9 530 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 TRABDQ9H4I3 376 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
SMG1-203ENST00000532700 PDZK1P1A8MUH7 402 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 METTL18O95568 372 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 PRSS56P0CW18 603 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 TYRP1P17643 537 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 XRCC1P18887 633 aaPredicted RBP17.5■□□□□ 0.39
SMG1-203ENST00000532700 LEPRP48357 1165 aaKnown RBP17.5■□□□□ 0.39
SMG1-203ENST00000532700 GEMP55040 296 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 CYP4F2P78329 520 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 TRA2AQ13595 282 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMG1-203ENST00000532700 WDR74Q6RFH5 385 aaPredicted RBP17.5■□□□□ 0.39
SMG1-203ENST00000532700 DET1Q7L5Y6 550 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 FAM129CQ86XR2 697 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 KLHDC8BQ8IXV7 354 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 ZNF843Q8N446 348 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 AGBL5Q8NDL9 886 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 RSC1A1Q92681 617 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 AHCYL2Q96HN2 611 aaKnown RBP17.5■□□□□ 0.39
SMG1-203ENST00000532700 TSGA10Q9BZW7 698 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 ZMYND15Q9H091 742 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 PIH1D1Q9NWS0 290 aaKnown RBP17.5■□□□□ 0.39
SMG1-203ENST00000532700 PSMD13Q9UNM6 376 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 CFAP46Q8IYW2 2715 aa17.5■□□□□ 0.39
SMG1-203ENST00000532700 MN1Q10571 1320 aaPredicted RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 LILRA5A6NI73 299 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 GPR89AB7ZAQ6 455 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 ERVH48-1M5A8F1 160 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 KIF1CO43896 1103 aaKnown RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 PRAMEF1O95521 474 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 GPR89BP0CG08 455 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 PBLDP30039 288 aaPredicted RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 PPM1FP49593 454 aaPredicted RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 EPHA4P54764 986 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 GPR18Q14330 331 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 NFE2L1Q14494 772 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 KCTD19Q17RG1 926 aaPredicted RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 DUS1LQ6P1R4 473 aaKnown RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 ABRAXAS1Q6UWZ7 409 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 TMEM26Q6ZUK4 368 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 LILRA3Q8N6C8 439 aaPredicted RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 FAM71DQ8N9W8 422 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 ATG4AQ8WYN0 398 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 NKD1Q969G9 470 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 TAAR9Q96RI9 348 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 SRPK1Q96SB4 655 aaKnown RBP17.49■□□□□ 0.39
SMG1-203ENST00000532700 FAM96AQ9H5X1 160 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 SLC39A1Q9NY26 324 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 HACD3Q9P035 362 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 PCDHGA4Q9Y5G9 962 aa17.49■□□□□ 0.39
SMG1-203ENST00000532700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 STX7O15400 261 aaKnown RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 POP7O75817 140 aaKnown RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 ANXA9O76027 345 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 CSTF2P33240 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMG1-203ENST00000532700 CDKN1CP49918 316 aaPredicted RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 ZNF140P52738 457 aaPredicted RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 TAF1AQ15573 450 aaPredicted RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 LINC00303Q3SY05 128 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 KCTD11Q693B1 232 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 ITPRIPL1Q6GPH6 555 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 TMEM220Q6QAJ8 160 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 PRUNE1Q86TP1 453 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 SYCE1Q8N0S2 351 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
SMG1-203ENST00000532700 SLC35B2Q8TB61 432 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 DTX3LQ8TDB6 740 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 SGF29Q96ES7 293 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 HES6Q96HZ4 224 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 NRTNQ99748 197 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 SPRY4Q9C004 299 aa17.48■□□□□ 0.39
SMG1-203ENST00000532700 SLC40A1Q9NP59 571 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms