RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MED8Q96G25 268 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF514Q96K75 400 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-207ENST00000527189 OSBPL8Q9BZF1 889 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 GBA3Q9H227 469 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 OCIAD1Q9NX40 245 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 UBR5O95071 2799 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-207ENST00000527189 GLYATL1P3A0A0U1RQE8 302 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 EFCAB7A8K855 629 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 PJA2O43164 708 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 MTX2O75431 263 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 STK10O94804 968 aaKnown RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 TJP3O95049 919 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 C9P02748 559 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 ANKRD34CP0C6C1 535 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 SLC19A1P41440 591 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 CHRNA4P43681 627 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 ARSDP51689 593 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 VAV2P52735 878 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 OTUD4Q01804 1114 aaKnown RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 DMPKQ09013 629 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 PRPSAP1Q14558 356 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 CHRNA6Q15825 494 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 KHDC1Q4VXA5 237 aaKnown RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 KIAA1614Q5VZ46 1190 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 CRTC3Q6UUV7 619 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 C11orf96Q7Z7L8 435 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 CDKL3Q8IVW4 592 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 TRIM48Q8IWZ4 208 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 DDHD1Q8NEL9 900 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 ACTL9Q8TC94 416 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 NKD1Q969G9 470 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 SLC40A1Q9NP59 571 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF624Q9P2J8 865 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-207ENST00000527189 DUSP10Q9Y6W6 482 aa13.18□□□□□ -0.3
CAPN1-207ENST00000527189 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 TEP1Q99973 2627 aaKnown RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 J3QKU1 62 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 STX7O15400 261 aaKnown RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 UBXN7O94888 489 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 AGTP01019 485 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 RBP3P10745 1247 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 SFTPCP11686 197 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 BRAFP15056 766 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 ADRA1AP35348 466 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A3P35503 534 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 EIF3EP60228 445 aaKnown RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 PDE1BQ01064 536 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 TAF1AQ15573 450 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 AMZ2Q86W34 360 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 LRRC57Q8N9N7 239 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 SPRY4Q9C004 299 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 RAB33BQ9H082 229 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 TRIT1Q9H3H1 467 aaKnown RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 FEZ2Q9UHY8 353 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
CAPN1-207ENST00000527189 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 FLNCQ14315 2725 aa13.17□□□□□ -0.3
CAPN1-207ENST00000527189 A8MU76 341 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A9O60656 530 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 POP7O75817 140 aaKnown RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 AMD1P17707 334 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A6P19224 532 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A1P22309 533 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 UGT1A4P22310 534 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 RPL10P27635 214 aaKnown RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 MAP4P27816 1152 aaKnown RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 HALP42357 657 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 LY6DQ14210 128 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 SNAP47Q5SQN1 464 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 ANKS6Q68DC2 871 aa13.16□□□□□ -0.3
CAPN1-207ENST00000527189 DARS2Q6PI48 645 aaKnown RBP13.16□□□□□ -0.3
CAPN1-207ENST00000527189 FAM151BQ6UXP7 276 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms