RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 OR2AG2A6NM03 316 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 H7C0S8 307 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 PGRMC1O00264 195 aaKnown RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 TAF4O00268 1085 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 RRP8O43159 456 aaKnown RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 GPR39O43194 453 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 DUX1O43812 170 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 EML2O95834 649 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 ZSCAN5DPP0CG00 497 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 ADRA1DP25100 572 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 MLLT3P42568 568 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 KCNJ1P48048 391 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 CACNG1Q06432 222 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 SEPT7Q16181 437 aaKnown RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 TBC1D25Q3MII6 688 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 FNBP1LQ5T0N5 605 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 WASH2PQ6VEQ5 465 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 RAB11FIP2Q7L804 512 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 PRUNE1Q86TP1 453 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 ZNF547Q8IVP9 402 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 NXPE1Q8N323 547 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 RASGEF1CQ8N431 466 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 MAGOHBQ96A72 148 aaKnown RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 CXorf40BQ96DE9 158 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 CDKN2AIPNLQ96HQ2 116 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 PDLIM2Q96JY6 352 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 TTC1Q99614 292 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 CMKLR1Q99788 373 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 EPB41L1Q9H4G0 881 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 FAM96AQ9H5X1 160 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 WASH6PQ9NQA3 447 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 EIF2B3Q9NR50 452 aaKnown RBP14.05□□□□□ -0.16
BRCA1-218ENST00000489037 RAXQ9Y2V3 346 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 PCDHGA8Q9Y5G5 932 aa14.05□□□□□ -0.16
BRCA1-218ENST00000489037 FRYQ5TBA9 3013 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 IGHV1OR21-1A0A087WYE8 117 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 A6NCN8 305 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CCL22O00626 93 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CASC3O15234 703 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 JMJD7P0C870 316 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 XRCC1P18887 633 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 RPL10P27635 214 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CD1CP29017 333 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 PBLDP30039 288 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CTSCP53634 463 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 EPHA4P54764 986 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 ERVPABLB-1P60509 514 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 SARNPP82979 210 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CCDC38Q502W7 563 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 AGAP9Q5VTM2 703 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 ZNF449Q6P9G9 518 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 B3GNT8Q7Z7M8 397 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 RBM12BQ8IXT5 1001 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 BEND7Q8N7W2 519 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 PRELID2Q8N945 189 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 GLIS1Q8NBF1 620 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 PPHLN1Q8NEY8 458 aaKnown RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 RANBP9Q96S59 729 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 OSBPL9Q96SU4 736 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 RDH14Q9HBH5 336 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CASS4Q9NQ75 786 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 ZDHHC3Q9NYG2 299 aa14.04□□□□□ -0.16
BRCA1-218ENST00000489037 TTC7AQ9ULT0 858 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-218ENST00000489037 CCDC78A2IDD5 438 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 MGAT4DA6NG13 374 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 MROH6A6NGR9 719 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 AGAP14A8MT82 685 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 F8W8V4 182 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 CES2O00748 559 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 PLD2O14939 933 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 TNFSF15O95150 251 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 ATP1B2P14415 290 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 PPARGP37231 505 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 MAPK9P45984 424 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 NPY2RP49146 381 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 PDX1P52945 283 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 DRG2P55039 364 aaKnown RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 PCBP4P57723 403 aaKnown RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 CDK16Q00536 496 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 ZFP36L1Q07352 338 aaKnown RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 DMPKQ09013 629 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 SQSTM1Q13501 440 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 TRA2AQ13595 282 aaKnown RBP eCLIP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 LYPLAL1Q5VWZ2 237 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 NKAIN2Q5VXU1 208 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 TMEM71Q6P5X7 295 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 IGF2-ASQ6U949 168 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 C11orf96Q7Z7L8 435 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 SERPINA9Q86WD7 417 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 ZNF761Q86XN6 746 aaPredicted RBP14.03□□□□□ -0.16
BRCA1-218ENST00000489037 OR4D9Q8NGE8 314 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms