RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SUFUQ9UMX1 484 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 GPR34Q9UPC5 381 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 TMEM98Q9Y2Y6 226 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 CACNA1EQ15878 2313 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 RALGAPA1Q6GYQ0 2036 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 PI4KAP42356 2102 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 PIKFYVEQ9Y2I7 2098 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 UQCRHLA0A096LP55 91 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 OR2AG2A6NM03 316 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 E5RI56 91 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 PROB1E7EW31 1015 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 ARHGAP33O14559 1287 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 KMOO15229 486 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 OR1I1O60431 355 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 FOXD2O60548 495 aaPredicted RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 KCNJ13O60928 360 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 S1PR4O95977 384 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 C1QAP02745 245 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 CSF2P04141 144 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 UQCRHP07919 91 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 CTSEP14091 401 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 PKMP14618 531 aaKnown RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 JUNDP17535 347 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 HSD17B3P37058 310 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 POLD2P49005 469 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 CCT8P50990 548 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 HK3P52790 923 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 CTSCP53634 463 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 ILF3Q12906 894 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD4-202ENST00000430771 EIF2B5Q13144 721 aaKnown RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 SLC29A2Q14542 456 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 TMED2Q15363 201 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 ZNF423Q2M1K9 1284 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 GRTP1Q5TC63 336 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 FAM45BPQ6NSW5 357 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 TMEM220Q6QAJ8 160 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 FSTL5Q8N475 847 aaPredicted RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 RASGEF1AQ8N9B8 481 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 FAM45AQ8TCE6 357 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 HM13Q8TCT9 377 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 HNRNPLLQ8WVV9 542 aaKnown RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 VPS39Q96JC1 886 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 LINC00615Q96LM1 132 aaPredicted RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 PAFAH2Q99487 392 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 ELF4Q99607 663 aaPredicted RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 RBBP8Q99708 897 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 GSDMCQ9BYG8 508 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 P2RY12Q9H244 342 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 MRPL40Q9NQ50 206 aaKnown RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 SMYD2Q9NRG4 433 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 TRNAU1APQ9NX07 287 aaKnown RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 SPASTQ9UBP0 616 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 ZNHIT2Q9UHR6 403 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 CRYL1Q9Y2S2 319 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 SNX11Q9Y5W9 270 aa10.85□□□□□ -0.67
CHD4-202ENST00000430771 DNMT3AQ9Y6K1 912 aaPredicted RBP10.85□□□□□ -0.67
CHD4-202ENST00000430771 FAM95CA0A1B0GW59 222 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 CXorf49A8MYA2 514 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 KPNA5O15131 536 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 VPS26AO75436 327 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 NUDT17P0C025 328 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 ZNF806P0C7X5 589 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 EPHA8P29322 1005 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 PBLDP30039 288 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 FMO4P31512 558 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 SPRP35270 261 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 MSH2P43246 934 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 SERPINB9P50453 376 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 LIMK2P53671 638 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 IFFO1Q0D2I5 559 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 ELOCQ15369 112 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 UAP1Q16222 522 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 SYTL3Q4VX76 610 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 PYCR3Q53H96 274 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 CNSTQ6PJW8 725 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 RD3Q7Z3Z2 195 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 ZC3HC1Q86WB0 502 aaKnown RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 GPATCH11Q8N954 259 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 SLC44A1Q8WWI5 657 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 KCNJ9Q92806 393 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 TSACCQ96A04 125 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 SGF29Q96ES7 293 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 CCDC97Q96F63 343 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 ATXN7L3BQ96GX2 97 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 AARSD1Q9BTE6 412 aaKnown RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 LRRC61Q9BV99 259 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 PSMC3IPQ9P2W1 217 aaPredicted RBP10.84□□□□□ -0.67
CHD4-202ENST00000430771 RAPGEFL1Q9UHV5 662 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 ZNF180Q9UJW8 692 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 PSAT1Q9Y617 370 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 PRSS21Q9Y6M0 314 aa10.84□□□□□ -0.67
CHD4-202ENST00000430771 ZFC3H1O60293 1989 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms