RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PPM1MQ96MI6 270 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 YTHDF1Q9BYJ9 559 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 RNF112Q9ULX5 631 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 UBA6A0AVT1 1052 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 EEDO75530 441 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 UMPSP11172 480 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 CKBP12277 381 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 CCL5P13501 91 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PCSK1P29120 753 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PLA2G16P53816 162 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 MTPNP58546 118 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 GALNT3Q14435 633 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 ALFQ53S48 1182 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 COQ5Q5HYK3 327 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 BROXQ5VW32 411 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 GALNT7Q86SF2 657 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC22A17Q8WUG5 538 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 TRUB1Q8WWH5 349 aaKnown RBP13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 SMURF2Q9HAU4 748 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 GALPQ9UBC7 116 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 PSME2Q9UL46 239 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 ERGIC3Q9Y282 383 aa13.98□□□□□ -0.17
CLCNKA-202ENST00000375692 H0YAE9 185 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ECI2O75521 394 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 CLPXO76031 633 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 FMO4P31512 558 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 MLLT6P55198 1093 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 EEFSECP57772 596 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 PPP1R8Q12972 351 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SPCS2Q15005 226 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 RGS21Q2M5E4 152 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 AASDHQ4L235 1098 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 GTF2IRD2BQ6EKJ0 949 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 GTF2IRD2Q86UP8 949 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 HS3ST5Q8IZT8 346 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 DTWD1Q8N5C7 304 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 DNAJC5GQ8N7S2 189 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 OR10T2Q8NGX3 314 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 NSMCE2Q96MF7 247 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 HBEGFQ99075 208 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 TSEN34Q9BSV6 310 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 PAK6Q9NQU5 681 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ABCC13Q9NSE7 274 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 FAM105AQ9NUU6 356 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 GNPTGQ9UJJ9 305 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 LEF1Q9UJU2 399 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC27A5Q9Y2P5 690 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC30A1Q9Y6M5 507 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 KIAA0100Q14667 2235 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 AXIN1O15169 862 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 NOBOXO60393 691 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 XYLBO75191 536 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ALPLP05186 524 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 PRR35P0CG20 571 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 CDH3P22223 829 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 AQP6Q13520 282 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 MEP1AQ16819 746 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SETMARQ53H47 684 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ANKS6Q68DC2 871 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 FAM171BQ6P995 826 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SPATA19Q7Z5L4 167 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SPARTQ8N0X7 666 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 FAM86B1Q8N7N1 296 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ZNF599Q96NL3 588 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 CDK15Q96Q40 435 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 DGCR6LQ9BY27 220 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 TOR3AQ9H497 397 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 TFB2MQ9H5Q4 396 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 SP110Q9HB58 689 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ASB1Q9Y576 335 aa13.97□□□□□ -0.17
CLCNKA-202ENST00000375692 ARVCFO00192 962 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 THRBP10828 461 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 CRHBPP24387 322 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 HTR1EP28566 365 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 OPRL1P41146 370 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 ALDH3A2P51648 485 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 GSTM4Q03013 218 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 EMX2Q04743 252 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 DAG1Q14118 895 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SNX29P2Q8IUI4 249 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SLC43A3Q8NBI5 491 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 PNPT1Q8TCS8 783 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 PROKR1Q8TCW9 393 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 MUC13Q9H3R2 512 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 SMOC2Q9H3U7 446 aa13.96□□□□□ -0.17
CLCNKA-202ENST00000375692 CARS2Q9HA77 564 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms