RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 NOMO1Q15155 1222 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 TGIF1Q15583 401 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 SLC1A5Q15758 541 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 ATP13A5Q4VNC0 1218 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 SNAP47Q5SQN1 464 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 MANEAQ5SRI9 462 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
TOM1-218ENST00000608674 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 SNRNP27Q8WVK2 155 aaKnown RBP13.05□□□□□ -0.32
TOM1-218ENST00000608674 OXNAD1Q96HP4 312 aaPredicted RBP13.05□□□□□ -0.32
TOM1-218ENST00000608674 MRGPRX2Q96LB1 330 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 VPS35Q96QK1 796 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 OSBPL8Q9BZF1 889 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 ZCCHC2Q9C0B9 1178 aaKnown RBP13.05□□□□□ -0.32
TOM1-218ENST00000608674 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 FOXJ2Q9P0K8 574 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 TMEM9Q9P0T7 183 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 DUSP10Q9Y6W6 482 aa13.05□□□□□ -0.32
TOM1-218ENST00000608674 A6NCN8 305 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 STMND1H3BQB6 276 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 STX7O15400 261 aaKnown RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 TJP3O95049 919 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 VIPP01282 170 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 FGF3P11487 239 aaPredicted RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 FECHP22830 423 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 SPAM1P38567 509 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 VAV2P52735 878 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 EPHA4P54764 986 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 OTUD4Q01804 1114 aaKnown RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 TMEM115Q12893 351 aaPredicted RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 WDR74Q6RFH5 385 aaPredicted RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 FAM151BQ6UXP7 276 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 TRAPPC5Q8IUR0 188 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 TTC30BQ8N4P2 665 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ZSCAN1Q8NBB4 408 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ACRBPQ8NEB7 543 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ACTL9Q8TC94 416 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ART4Q93070 314 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 WBP1Q96G27 269 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
TOM1-218ENST00000608674 FICDQ9BVA6 458 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 GBA3Q9H227 469 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 EPB41L1Q9H4G0 881 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 IL26Q9NPH9 171 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 IL17CQ9P0M4 197 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 SLC23A2Q9UGH3 650 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
TOM1-218ENST00000608674 GLYATL1P3A0A0U1RQE8 302 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 GOLGA6L9A6NEM1 432 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 C2orf81A6NN90 581 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 A8MU76 341 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 PJA2O43164 708 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
TOM1-218ENST00000608674 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
TOM1-218ENST00000608674 AGTP01019 485 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 RBP3P10745 1247 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 IDSP22304 550 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 PTPN7P35236 360 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 ATP1A2P50993 1020 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 ITGA9Q13797 1035 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 CHRNA6Q15825 494 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 SEPT7Q16181 437 aaKnown RBP13.03□□□□□ -0.32
TOM1-218ENST00000608674 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 KIAA1614Q5VZ46 1190 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 PLXDC1Q8IUK5 500 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 LRRC45Q96CN5 670 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 LACRTQ9GZZ8 138 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 AMFRQ9UKV5 643 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
TOM1-218ENST00000608674 REXO2Q9Y3B8 237 aaKnown RBP13.03□□□□□ -0.32
TOM1-218ENST00000608674 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
TOM1-218ENST00000608674 LILRA5A6NI73 299 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 B4E171 279 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 KCNN4O15554 427 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 EFSO43281 561 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A9O60656 530 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 AMD1P17707 334 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 XRCC1P18887 633 aaPredicted RBP13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A6P19224 532 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A1P22309 533 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 UGT1A4P22310 534 aa13.02□□□□□ -0.33
TOM1-218ENST00000608674 RPL10P27635 214 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms