RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 MAGEE1Q9HCI5 957 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 DDX28Q9NUL7 540 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 URADA6NGE7 173 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 ANKDD1BA6NHY2 528 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MAFKO60675 156 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CBSLP0DN79 551 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CBSP35520 551 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MPP1Q00013 466 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 IL1RL1Q01638 556 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 BLMHQ13867 455 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PDCD4Q53EL6 469 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 AVL9Q8NBF6 648 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 NRBF2Q96F24 287 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 GPR22Q99680 433 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 RAB11FIP5Q9BXF6 653 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PCBD2Q9H0N5 130 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 IRF2BPLQ9H1B7 796 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 MIEF1Q9NQG6 463 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 DNAJC11Q9NVH1 559 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TCRBV5S1A1TA0A578 114 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 RGSL1A5PLK6 1076 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 FAM72CH0Y354 149 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SHOX2O60902 331 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 SEC22BO75396 215 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PENKP01210 267 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 SERPINA6P08185 405 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 PRKACBP22694 351 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 SLC1A2P43004 574 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CHRNA4P43681 627 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 HSPA13P48723 471 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 RPL34P49207 117 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 CBX2Q14781 532 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 SAMD4BQ5PRF9 694 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 WASHC2DQ5SRD0 308 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 FAM72AQ5TYM5 149 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 FAM72DQ6L9T8 149 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 TRMT10BQ6PF06 316 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 ZNF438Q7Z4V0 828 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 FAM72BQ86X60 149 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 CAMK1DQ8IU85 385 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 BBS7Q8IWZ6 715 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 LSM14AQ8ND56 463 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 ICA1LQ8NDH6 482 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 IGSF8Q969P0 613 aa7.49□□□□□ -1.21
TCF4-216ENST00000562680 RPL10LQ96L21 214 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 TDRKHQ9Y2W6 561 aaKnown RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 GPC6Q9Y625 555 aaPredicted RBP7.49□□□□□ -1.21
TCF4-216ENST00000562680 EVPLQ92817 2033 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 NR5A2O00482 541 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 TM7SF2O76062 418 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 AP2A2O94973 939 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 ADH1BP00325 375 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 USP46P62068 366 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 BTKQ06187 659 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 IL27RAQ6UWB1 636 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 HTR3DQ70Z44 454 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 RRM2BQ7LG56 351 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 C10orf107Q8IVU9 208 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 TRPC4APQ8TEL6 797 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 NT5C3BQ969T7 300 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 THUMPD3Q9BV44 507 aaKnown RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 SEMA4BQ9NPR2 832 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 KLQ9UEF7 1012 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 PSME2Q9UL46 239 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 ASF1AQ9Y294 204 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CAB39Q9Y376 341 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 PIPSLA2A3N6 862 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 PSMD12O00232 456 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 MRASO14807 208 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 STK16O75716 305 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CA3P07451 260 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CACNA2D1P54289 1103 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 AP1S2P56377 157 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 LCP2Q13094 533 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 LAPTM5Q13571 262 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CACUL1Q86Y37 369 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 GALNT13Q8IUC8 556 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 TNS4Q8IZW8 715 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 GLIS1Q8NBF1 620 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 DCAKDQ8WVC6 231 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 FATE1Q969F0 183 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 FAM162AQ96A26 154 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 SLC39A13Q96H72 371 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CYP2S1Q96SQ9 504 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 BTBD10Q9BSF8 475 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 ZBP1Q9H171 429 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 CCDC134Q9H6E4 229 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 C8orf33Q9H7E9 229 aaPredicted RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 PREBQ9HCU5 417 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 INTS7Q9NVH2 962 aaKnown RBP7.48□□□□□ -1.21
TCF4-216ENST00000562680 ELOVL2Q9NXB9 296 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 TMEM216Q9P0N5 145 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 TCRBV7S3A2A0A539 114 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 PGLSO95336 258 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 OCM2P0CE71 109 aa7.48□□□□□ -1.21
TCF4-216ENST00000562680 OCMP0CE72 109 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms